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Simple sequence repeat (SSR)
>UN49287
ACAATTACAAACCAAATCATTAAAAAAAACTAGATAAAAGCATAACCATACGACTTTTTCTTAGTAGATAAAAACCAAAAGCGACCAGATCTAG
AAACCCTAACCCAAACACGAATTCAAGAGCTAGTGAACTTAGTAACAGCCTTAGTCCCCTCAAAAACGGCGTGCTTAGCTAGCTCTCCAGGGAG
AACAAGCCTAACGGCGGTCTGGATCTCCCTCGAGGTGATGGTCGGCTTCTTGTTGTACCTAGCGAGCTTGGACGCCTCCTGTGCTAGCTTCTCG
AAGATGTCGTTGATGAAGCTGTTCATGATCCCCATGGCCTTGCTCGAGATCCCGATGTCAGGGTGGACCTGTTTCAGAACCTTGAAGATGTAGA
TCTTGTACGTCTCGATGCTCTTCTTGTTCCGCTTCTTCTTCTTGTCGATGGCCCCGGCCTCCTTCGGCAGCTTCTTCCCGGCCTTTGGCTTCTT
CTCCGCCGGGGCTTTCTCGGCGACCTCCTCAGCTGGCTTCTCCGCGGCGGCGGCGGCGGGTTTCTTCTCTGCTGGCTTCTTTCCTGCCTTTGGT
GCCATCTTTGATTCTTTGTTTTTGGGAGTGGAGAATTAGGTTTTTGAGATTTGAGATCC |
Primers for UN49287 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GATGTCAGGGTGGACCTGTT |
59.817 |
20 |
ATCAAAGATGGCACCAAAGG |
59.933 |
20 |
241 |
336 |
576 |
2 |
GATGTCAGGGTGGACCTGTT |
59.817 |
20 |
CACCAAAGGCAGGAAAGAAG |
59.846 |
20 |
230 |
336 |
565 |
3 |
GATGTCAGGGTGGACCTGTT |
59.817 |
20 |
CAGGAAAGAAGCCAGCAGAG |
60.269 |
20 |
221 |
336 |
556 |
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