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Simple sequence repeat (SSR)
>UN49289
TCATCATATTCATAAAGTTTATAGCTGAGTGAAACGAATCTCACAGATAAAAGGACAAACATAACATAAAAACTAAAAAAACAAAACTAATCTG
AAGTGAGACTTTTGGATACAAGCATAAATGCCTTTTGTCTCACTTTTCCCAGAATAGATACCATAAAACAAAAGATTCGAAACTTAAAGAGTAG
CATAAGACAAACTCATCTCATTATTCGTCATCGCTGTCTTTGCTTTTCTTCTTCTTCTCCTTCTTTTTCTTCTTGTCACTCTTCTCTGCTGATT
CACCACCACCAGCTTCATCTGTCTCCTTGTCCTTCTTTTTCTTCTTCTTCTTCTCACTCTTCTCTGCTGGTGATTCATCTTCACCATTAACCGC
AGCAGCAGCTTCATCTGTCTCCTTGCTCTTCTTTTTCTTCTTCTTCTCTGACTTCGGTGTTGCCAACTCTTCTTTATCCTCCTCCTTGTCCTCC
TTCTTCTTCTTCTCCTTCTTCTCAGACTTCACCTTCTCTTCAACCTCAACATCTTTTGTTTTGGCTTTCTTGGTGGACACAGCCGCAGGGCTGG
CGCTGCTCTCATCATGCTTACGCTTGCGCACTTCTCCACTCTCAGCCTCAACCTTCTCAGGAGCGGCAGCAGCACCAGCAGCGATCATAGCATC
ACCTCCAGTAGGCAAAACAACATTCCTGCTCCACTCAACAGGCGTTTTCTCATTCGGCTTCCC |
Primers for UN49289 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GATTCACCACCACCAGCTTC |
60.52 |
20 |
TCCACCAAGAAAGCCAAAAC |
60.088 |
20 |
269 |
279 |
547 |
2 |
GATTCACCACCACCAGCTTC |
60.52 |
20 |
GTCCACCAAGAAAGCCAAAA |
60.088 |
20 |
270 |
279 |
548 |
3 |
GATTCACCACCACCAGCTTC |
60.52 |
20 |
AAGGAGGACAAGGAGGAGGA |
60.186 |
20 |
194 |
279 |
472 |
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