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Simple sequence repeat (SSR)
>UN04659
GGAATGAGGTAAAAAAAATATAAATTAAAAATATCTTTGTTTTTCTTCTTCCTTCTTCTTCTTTCATATTGATGTGTACTCTTCACCTCTAAGT
TTTGACCAAAAAAGCTTCGTCCTTTTCTCTTTGGAACATACCCAAGATTGCGTTACAACTTGAGATTCACTCTTCATATCTCGTCTTCGTGATG
AATTATCATCAATGGAGATGATGAGCTCTTCTTCTTCTTCTACTACACAAGTTGTACCGTTCAGAGAGATTGGGATGTATGAACCGTTCCAACA
GTTGTCTGGTTGGGAAAATGCTTTCAACATTATAGGTAGTACTAGTAATCAGAACAACAACAATCCGAGTTCTTCCACAGTTCCTGAGGTGGAT
GCTAGACCAGAAGCAGATGATCACAATAAGGCGAATTATACTTCTATGTATAATAACTCTGTTGAAGCCGAACCTTCTAGTAATAATGATCAGG
ACGAAGACCAAGTCAATGATAAGATGAAACGGCGCTTGGCCCAGAACCGAGAGGCTGCTCGCAAAAGCCGTTTGAGAAAGAAGGCACATGTTCA
GCAGTTAGAAGAAAGCAGGCTAAAGTTATCACAGCTCGAGCAGAACTTGCAAGAGCTAGGCA |
Primers for UN04659 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TTGGAACATACCCAAGATTGC |
59.815 |
21 |
TTGAAAGCATTTTCCCAACC |
59.916 |
20 |
185 |
125 |
309 |
| 2 |
TTGGAACATACCCAAGATTGC |
59.815 |
21 |
GCATCCACCTCAGGAACTGT |
60.12 |
20 |
254 |
125 |
378 |
| 3 |
GCTTCGTCCTTTTCTCTTTGG |
60.359 |
21 |
TTGAAAGCATTTTCCCAACC |
59.916 |
20 |
202 |
108 |
309 |
|
|
