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Simple sequence repeat (SSR)
>UN49352
ATAGTGTTCTTGATTCTTTATTTATTCTAACAGGAGGAAACAACAACAGTAGCTTAACCAGATAATAGATGGTGGTTAGAGCTTCTTTCCTCCC
TTTTTTTAATGGACAAACGAATAAAAAAACAGAGCAGAGCTATTATAGGTTGACGGGGGACGTACATACTAGCTAGGGCTCTTCTGCTACTTCT
TCTTCTTCATCTTGATGTATCATGTTGACAAGCATATCGACTTGCTCTTTCAACATTGTATTCTCTCTTTCTATCTCTGTTCTCTTGCTTCTCT
CTTGTAGCAGCTGAAGTTGCAGATGCTCTAAGCAACGTGAGTCCTCTTCTAGCTGCTCGTTTAACCCATCTATCTCTCGATCCTTTCTGTTCAT
TTCTTGGACAGCGATTTTACGCATGCTCTCAACCACATCAACGTTCACCAGCTTCCTCTTCTTACCAATCAACCAGCCTTTAGGATAGTTTGCT
GACTCGAAATCTGGAGGTGGCAAGAGCGAATCAGCATCTGTTGGTCGCTTTCCGTTCAGGTTTGTAATGGGTTCCAGTGGCTCAAACAGAGCTT
TTCTTTTCTCGGACAGAACAGGAGGAGTTGTGGTCATTGGTTCCCCAACTTTCTCGGTTTCCATCGCTGTTGTCTCATCCTTCTCTGGTGTGAT
CTCCATAGCAGCTTCTAGTGCCTTGTCTGGGTTCACAGATGCTGATCTTTTTCTTGACTTCCACGCGATCTTGGTGGTAGAGACAGGGAAAAAC
CCTCCCACAAATCCATCACCAACTGTATTCTTCTTCTTATTCTCTCCCTCAAATCCATTCCCTTTCTCCATTTTAATCTGAAAAGGTTTCTCAG
GAAAGAAACAGACACGCGGTTTGGAGAGAAAAAGAAGAACAAGAAGATAGCGTACGCGAGGGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
AGAGAGAGAGAGGTTGAACGGTAAAGGTTTGGCGTTTCGGTTGCAACTACGAAAGGCTTTTGCGTTGTTCTTCACACTTGTTGTTATATC |
Primers for UN49352 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
| 1 |
AAAAACCCTCCCACAAATCC |
60.032 |
20 |
CGCAAAAGCCTTTCGTAGTT |
59.536 |
20 |
258 |
747 |
1004 |
| 2 |
GGAAAAACCCTCCCACAAAT |
60.032 |
20 |
CGCAAAAGCCTTTCGTAGTT |
59.536 |
20 |
260 |
745 |
1004 |
| 3 |
AAAAACCCTCCCACAAATCC |
60.032 |
20 |
GAAGAACAACGCAAAAGCCT |
59.499 |
20 |
267 |
747 |
1013 |
|
|