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Simple sequence repeat (SSR)
>UN49404
CGCTTTTGCTCAAGGGGCGTTTGGTAAGCTGTACAGAGGGACTTACAAAGGAGAGGATGTAGCCATCAAGCTACTCGAGAGGCCAGAGAACAGT
CCCGAAAAGGCGCAAGCCCTGGAACAGCAGTTTCAGCAGGAGGTTTCTATGCTCTCGTTTTTGAAACACCCCAACATCGTTAGGTTCATCGGCG
CGTGCATTAAACCGATGGTGTTGTGCATCGTTACTGAATATGCAAAAGGAGGTTCGGTCAGACAGTTCTTGACTAAGAGACAAAATCGAGCTGT
GCCGTTGAAGTTGGCTGTTAAGCAGGCATTGGATGTTGCTAGGGGTATGGCTTATGTCCATGAGCGGAACTTTATACACAGGGATCTGAAGTCA
GATAACCTCCTCATATCAGCTGATCGCTCCATCAAGATTGCTGATTTTGGCGTTGCAAGAATTGAAGTTCAAACCGAAGGGATGACACCAGAGA
CCGGGACTTACAGATGGATGGCGCCAGAGATGATCCAGCATAGACCCTACACTCAGAAAGTAGACGTGTATAGCTTTGGGATCGTGCTGTGGGA
GTTGATAACGGGTCTGTTACCGTTCCAGAACATGACTGCAGTTCAAGCTGCATTTGCGGTAGTGAACCGGGGAGTGCGTCCGACCGTCCCAGCG
GACTGTCTCCCTGTGCTTGGGGAGATCATGACGCGTTGCTGGGATGCAGACCCTGAAGTCCGTCCTTGTTTCGCAGAGATTGTCAATCTTCTTG
AGGGGGCTGAAACCGAGGTAATGACGACTGTGAGGAAAGCCCGTTTCAGGTGTTGCATGACGCAACCAATGACAATCGACTAAGAGAGAGAGCA
AGAAAGGGCTTTAGATATATGTAAGTTTGTGTGTGTGTGTATTGGTATTTAATATCCGTTTGTATCTCTTTTACCATGATAGGAGAAGTAACCC
AACCATTTTAGACTACTGATATAGAAAAAAGGTATGTACTGTGACTGTCTCAAGTGTTTGGTTTAGTTTTGAATTCATTGTCCTCTACTGTGGA
CCGAAGAGGCATTTGATGTGTGATGAATGCCTTATTCTGTCTCCCTCTCTCTCTTCTAAATTCGTGTATCAGTAGCATCTCACTAAGTATGACA
TG |
Primers for UN49404 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GTTTCAGGTGTTGCATGACG |
60.16 |
20 |
ACATCAAATGCCTCTTCGGT |
59.556 |
20 |
259 |
795 |
1053 |
2 |
GTTTCAGGTGTTGCATGACG |
60.16 |
20 |
CATCAAATGCCTCTTCGGTC |
60.603 |
20 |
258 |
795 |
1052 |
3 |
GTTTCAGGTGTTGCATGACG |
60.16 |
20 |
TCGGTCCACAGTAGAGGACA |
59.257 |
20 |
244 |
795 |
1038 |
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