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Simple sequence repeat (SSR)
>UN49413
TGAACAGCAATAATAGTAATTCATATTTCAGGTAATGCCGTATACAATCAGTGCATATAATAGAAAAAAATTAAACGAACAAAAACAATGAACA
CGATAGATTACACGATCACAAACTCTTGTTTTGAGTAAACCACACGCTTCGAATAAGAAAATCTAACCGATATATATATATCTCTCTTTTAAGT
GTAGAAACTCAAACTCTTCCCGCATGAGGCCTTTCACCGGCGACTGTTTCTCCAACTCCGACGTGAATGGCTCCGATGCACAATAACTGAGTAG
CACTCACAATGATTGTCATAACTTCAAGAGTTCTTAAATTGGCCTCGGTCCAGCCTATGTTGATCTCCTTACATGCCAATCCCATGGCGAGGAG
AGTGAGAGACCAGGAGATGAGAGAGGAAGCCGCTGCGGAGTGGAGATTCGGGGAGTCCCACTCAAGAACGTTCATGATTCCGGCGAGTGAAGTC
GTCATTCCGACGACGCCGGCGATCAGCGAGAATATTACGAAAAAACCAGTCGCCATGTTCCCCACCGGGAAGTAAATAGGGAAGATCTTCGCCG
GAAGAGAAAGCACCGACGCAGACTCGCGAGCTCTCTCGATGCCGTGATTAACAGCCCAGGAAGCGATGATGGTGACGACAAAATAGAGACCAAG
ATTCAGCAGCAGAAGCATGAAAGCTGCCGACTTTGATCCTCCTGAAGCCATTATTAATTCTTCCGACAAGAAATTAAAAGCCTTGTAAGAGAAC
CTGACAAGATCCTTGTCTATGTTTGTTTCTCTGTCTTGGGGGTCC |
Primers for UN49413 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TGAGTAAACCACACGCTTCG |
59.904 |
20 |
TCTCTCACTCTCCTCGCCAT |
60.096 |
20 |
260 |
126 |
385 |
| 2 |
TGAGTAAACCACACGCTTCG |
59.904 |
20 |
AGTTATTGTGCATCGGAGCC |
60.103 |
20 |
151 |
126 |
276 |
| 3 |
TGAGTAAACCACACGCTTCG |
59.904 |
20 |
GGGATTGGCATGTAAGGAGA |
59.894 |
20 |
240 |
126 |
365 |
|
|
