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Simple sequence repeat (SSR)
>UN49439
CGTACAAAGTTGACCCCTTTTTATGTCAAATAAAATGTAACAAAAGATTATAAGACTAATGCATAAAACAGAGTATCGATGACCATAACATGTA
AGAAACAGAGTATTTATTTAATGAAAGAGAGAACGAACAAACAAACTCTCTCTCAGTATCCGTAATCATAAGCGAACTCGTTGACACCAACCAT
GGCTGAGACGACTTGGGAGGCGATGTAGAAGCTTCCACCTAAGATGATCACGATGAGAACGGCGGAGATCGGGTTCTTGAGGAGTTCGAAGATG
GGCTCGAAGACAGCGGAGAGAGCTCCCGTGCTGACGGTGAGTGCGTAAAGACCGTACCTTCTCACGTTGTCCCAGAACTCTTCCATCAGAGGAC
CTTCCGGTCCCAAAGCCATCGCCTTTTCTCCATCTATTCCTAATGCCAAAGCCATCATCAAACCTACGGAGACACCAGTCACCAAAGCTTGTCT
CAGTTGCTTCTTCTCCAGACACAAAGGTTGTGTCTTTTCAAGCCTGGTTCTGTTGCTTTCCACCGTTGATCTTCTTCTTCTTCTGGATGCTTCG
CACTGAACACGGCGGCACGGTGTTCTGGTGCTTATGCTTGAGCTCGGAGACGACGCCTTAGCTGGTGCTAGTAATCTGCTGCTGCTCAAATGGA
GATGAGGTTGCAGAGAAGATAGTTTCATTTTGGGGAGAGACATCATCATAGTCATCATCCTCTCTCTCC |
Primers for UN49439 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TAATGCCAAAGCCATCATCA |
60.035 |
20 |
CTAGCACCAGCTAAGGCGTC |
60.176 |
20 |
219 |
417 |
635 |
| 2 |
TTCCTAATGCCAAAGCCATC |
60.038 |
20 |
CTAGCACCAGCTAAGGCGTC |
60.176 |
20 |
223 |
413 |
635 |
| 3 |
AGCCATCATCAAACCTACGG |
59.955 |
20 |
CTAGCACCAGCTAAGGCGTC |
60.176 |
20 |
210 |
426 |
635 |
|
|
