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Simple sequence repeat (SSR)
>UN04666
GGAAGGTCCGCCGTTTTGGTTCCATACAGATTCTGGGCTCATTTCTTCTTCTTTTATCGATTGAATTTTTTTTTTTTTAATTTGTTCTTTGTAC
ATAAAAACCCTAATTTTGATACATAAGCTTTAAGAACCTTCTCGAGAGATCCTTTGGTGTACACTTTACTGTTTTTTTGGATTTGATTTGATTT
GATTTGAAGAAGAAGAAATGCCTCCAAAGCAACAACCAAAGGCAGATTTGGCGAAAAAGCAGAAGCAAGTGGAAGACAAGACATTCGGTCTGAA
AAACAAGAACAAGAGCAAGAATGTTCAGAAGTATGTCCAGAGTCTCAAGCAATCTGTTCAACCCAAACCCGACGCTTCTAAAGTTGCAGCCAAG
AAAAAGAAAGAGGAAGAGAAAGCGAGAGAACAGGAGTTGAATGAGTTGTTCAAGGTTGCCATTAGTCAGCCTAAAGTTCCTGTTGGTGTGGATC
CAAAGTCCATCTTGTGTGAGTTTTTCAAGGCGGGGCAGTGTCAAAAGGGTTTCAAGTGCAAATTCTCTCATGATTTGAACATTCAAAGGAAGGG
TGAGAAGATCGATATCTACAGCGACAAGCGTGATGAAGATGGAGATATGGAGGAGTGGGATCAAGAGACCCTTGAGAAGGTTGTGGAATCGAAG
AAAAATGAATACAACCAGAACAAGCCAACTGATATTGTTTGCAAGTATTTTCTGGACGCGGTGGAAAAGAAACAGTATGGGTGGTTCTGGGCTT
GCCCCAACGGTGGCAAAGAGTGTCATTACAGACACGCTCTTCCTCCTGGGTATATCCTTAAATCTCAGATGAAGGCTCTCTTGGAAGAGGAGTC
ACAGAAGATGCCGGTAGAAGAAGAAATCGAAAACGAGCGTGCAAAACTGAAAACAGCAACACAAATGACACCTGCGTTATTTATGGAGTGGAAG
AGGAAGAAGATAGCTGAGAGAGATGCAGGTTTGGCTGCTTCTCAGGCGGAGAGAGCTAAGAACGACCGTATGAGTGGTCGGGAGCTGTTTCTGT
CCAATGCAAGCTTGTTTGTGGATGATGCTGAGGCTTTTGAAGAATACCAGAGGGAAAAAGAAGAGGAAGAGATTGAACAAAAGGAAAATAACAA
AGAAACAGAGGCAGGGACAAGCAAGAGTAGTGTTGATGCTGAACAGAGTTCGAAAGAAGTGGATGAAGACGACGAAGATGATGATGATGATGAT
GATGATGATTTGGACATGGACGAGCTTGATGAATTGGAAGCAAGCTTGTCGAAAGCGTCGATCCAGATTAGTGAGCCAAAGAATGAAGGATCAT
CATCTTGAGATGTGTGAGACGGAGAGGAAAGCACATGTTTTGGTTTGTGTACTTTCGATAATATTGGATTGTGTACTTTCAGTTACTGTCTTAA
TATTTTAAAGCTCATCAAAGACTAATACCCCCCCCTCTTGTTGAGAAAAAAAAAGGCTTTTCTCAACTCCTTAAAAAAA |
Primers for UN04666 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GCTGTTTCTGTCCAATGCAA |
59.847 |
20 |
CTTTCGACAAGCTTGCTTCC |
60.132 |
20 |
254 |
1024 |
1277 |
2 |
AAGAAACAGAGGCAGGGACA |
59.844 |
20 |
CTTTCGACAAGCTTGCTTCC |
60.132 |
20 |
150 |
1128 |
1277 |
3 |
AGAAACAGAGGCAGGGACAA |
59.844 |
20 |
CTTTCGACAAGCTTGCTTCC |
60.132 |
20 |
149 |
1129 |
1277 |
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