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Simple sequence repeat (SSR)
>UN49518
AGGACTGCAAAGTTCTGAATCAAAGTTTTCTCTCTCTACGTTTTTGTTTTCCTCCGAGAAACTCTCTCTCACTCGAATCTCGAAGCTTAAATTT
CGGATCTTACTTACTTACTTACAGCTGTCTCCTCGGATAGGAGACGACGACCATGAGCAGAGATCATCCTCCCGAGCCTCTTGATTTCTTCATC
TGGACTGTTGAGGACGTTGGATCTTGGCTTGAGGAGATCAACCTGGGGAGCTACCGCCTGATTTTCAAAGAGAATGGTGTCAACGGAGAGTATC
TCGAAAGCATGTCTGTGTTCACAACGGAACAGATTCTTCACTTCATAAGGAGGCACCACATGAAATGGGGAGACTTCATCACCCTCTGCAAAGA
ACTCAGGAGGATTAAAGTGGCTTGCTTGAAAGGTGAACAGAGAGTTCGACGGCCATGGTGGGCACCTTCTTGCCTCTCAGTAGTCTTTGTTAAG
GCGGCTAAGCGCAACCGACAGTCTCGTGTTGTATCTCTAAAGCTTGAGTCTTGACCATTTTTACACTTTGGATGTTTATGTACCTACGTACTTG
CCTCTCTATCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTTTTTTTCTGGTTTGGGGTTTGTCTGTGGAAATCAAAAGCCACACATGCAA
TGGGAAGAAACAAACTCAAGCCAAAAATGCTGTTTGGCTTTGGTAAAATCTTGCAAGGTGGGAGGAAAAACATTATGTTCTCTTTTTGTTTTTG
TTTTTGTTTTGTACTTCGGTGTATACAAAGTTTGTTCCCAGATGTTTAATATATTATCCGACAGATAAAATAGTATAGTAATTTGATTATATAC
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Primers for UN49518 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CCCTCTGCAAAGAACTCAGG |
59.982 |
20 |
ACAGACAAACCCCAAACCAG |
59.861 |
20 |
271 |
364 |
634 |
| 2 |
CCCTCTGCAAAGAACTCAGG |
59.982 |
20 |
GACAAACCCCAAACCAGAAA |
59.807 |
20 |
268 |
364 |
631 |
| 3 |
CCCTCTGCAAAGAACTCAGG |
59.982 |
20 |
ATTTCCACAGACAAACCCCA |
60.21 |
20 |
277 |
364 |
640 |
|
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