 |
Simple sequence repeat (SSR)
>UN04676
CAAATCCCTAAAGTTCAATACTGAATTCTTCAGCAGCAGCAAGCAAACACACTCTCTCTAAAATAATCTCTCTCTCTCTAAGGAAGAAGAATAA
GATGGGGTTACAAGGTCAACTCTCTGACGTTTCATCAGATTCAATCCCTCTCATGCTCGTCGCTCTCCTCGCTACTCTGTTCAAACACGTCCGC
TCTTTCTTCCTCCGCTTCTCCTCCTCCTCCTCCGTTTTGGACGAAGATGCTCCTCTCTCCATTTCCTCAGGGTTTGCTAACATCGCCGTACTCG
CCGACCAGCTCAAACTCAACCGTCTCTTCTCATACCCCTACGACCATAAGGCCGCCGCAGCCGCATCCGACTGCATCGTGTGCTTGTCTACACT
CAAGACCGGAGAAGAAGTGAGGAAGCTGGGATGCAGACACGTGTTCCACAAACAGTGTTTGGAAGATTGGCTTCAACATCTTAATTTCAATTGT
CCGCTTTGTAGATCTCCGTTGGTTGGTCGTGGAGGAGGATGTGAATCGATCTCTTCTCCTCTCTCTCTTCTCTCAGAAGTTCAGTGAGTTCTGT
TCATTGTCTGATGAACAAAAAAAAAGGGAAAGAGAAAGAGAGAAGAAGAGTTTGGGCGTTTTTTTGATCTCGCTGGCTTTCTCCTCTTTCTTTT
GTTTTTTTTTCTTTAGGGATTTGTGTGATATTATTATTTTTTTCTTCAAAAGGGGATTCTTCGAAATCTCTTCTATATATATTTTTTTTTGAGG
AATGTCTCAGATCAGATCTGAGAGGTTCTTTTGTTATTCAAATTTTCGCACATGTAAATTTTCTAGTATGAATTATGAAAAGTGTTTGTGTTGT
TCG |
Primers for UN04676 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CAGCAGCAAGCAAACACACT |
60.245 |
20 |
AGAGGAGCATCTTCGTCCAA |
59.95 |
20 |
211 |
34 |
244 |
| 2 |
CAGCAGCAAGCAAACACACT |
60.245 |
20 |
ACAGAGTAGCGAGGAGAGCG |
59.914 |
20 |
141 |
34 |
174 |
| 3 |
CAGCAGCAAGCAAACACACT |
60.245 |
20 |
AGGAGCATCTTCGTCCAAAA |
59.813 |
20 |
209 |
34 |
242 |
|
|
