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Simple sequence repeat (SSR)
>UN49615
GGGAATTTGGAATTTGAAGGCGCAAGGGCGTGGCCAGAGAGAGAGAGTGAGAGATGCCAAGAACTACACGCAGATCTGTAAATCAAAGGCTCCA
ATATATACAAGTTATCCATGAATTGCAGGAGGAGATCAAAATGTTACAGATTTCAAACGATAAACTCAATGGTGAGGGTCTCAATGGTCTAAGC
TACACCCAGCTGGCTTCACTTGAAAGTATGTTAAAGGAGGGCTTCCGCAATGTGCAAGAACAAACAGATAAGGCACACCATGAATTAACAGTCA
AGCAGATTGTTGAATGCGATGTTATGGGAAAGGAATGGCTTGACGCAAAAGAGAAAGAGGATTTGGCCTACCAATCGCTTCTGGCAAGGAGAAG
AAGAGCTTTGAGGAACAAGGCTAGAGAACTCCGTCTCAGACCTCCTCAAGACAGCCCCAGGAGTATACCTATAACCATGAAGATCTGATGTCAA
CCATCGAATGTTTGAAGATCGAGAAGGAGAGATTAAGGCTTTTGAACCAGAGAATGATTGGTAAAGAGCTTGACGGTATGGGTTACTCGGAGCT
GTTGGTGTTTAGCTGTGGGATACAGGGTGGTATGTTGAAAGCCGAAGAAGAGAAGAAGAAGATAAAACGTGCAAGGCAGGTTCTTAGGGGCGTT
TAGTAAGAGACTCTTGTGACTGAGTATATGTACTTAGGTAATATATATTGGTTCTAGCTTTGTGTGTTGATAATCTATGTCTCTCTGGTGATTG
TGATTATGATTAAGTTTAAAAGACTTGTGGTTTTGCTC |
Primers for UN49615 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GAATTTGGAATTTGAAGGCG |
59.525 |
20 |
AGCCAGCTGGGTGTAGCTTA |
60.037 |
20 |
201 |
3 |
203 |
2 |
GAATTTGGAATTTGAAGGCG |
59.525 |
20 |
GCCAGCTGGGTGTAGCTTAG |
60.037 |
20 |
200 |
3 |
202 |
3 |
GAATTTGGAATTTGAAGGCG |
59.525 |
20 |
CCATTGAGACCCTCACCATT |
59.779 |
20 |
179 |
3 |
181 |
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