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Simple sequence repeat (SSR)
>UN49644
TTTTTGCATATATTTCTCTTTAGTTTCTCCTTAGATCATCTAACTTTCTCACTCTCTCGCAATGCATGATCTTCGATCTTGTACCAGTGTGGAG
AGCTGAAATCGAGAAATCTTTTGTTTCCCCCTGAGAGACTAAATCGAATTAGAAGAAGAAGAAGAAAGCTGTCGGTCTCGGTGGTTGGCATTGG
CTGGTGTTGACAAATGGAATAGAAGTAAAGTTGCAGAGGAATGCACTCAGTGTCCTTGAAGCTCCTACTGGAAATGAAGATGACGATGATCTTG
ATTTCGAAAACACACTGAGGAATGGTTCTGATATGATTGTTTCTTTTCCAGCATCTGAGGACACACTGAAGCCTCATAAGTCGAAGCTAAGAAG
GCAGAGATCATCTCGGTCATCTCACAAGACCCTGAGCAGGTCTTTATCATCTGACTCCCAGTCTAAAAGCTCTGCTTTTACTCCCCCTCAGAAC
CTGATGAAGGTTGATCTTAGCAAACTGGAGATGCCAGCTTTACTGAAATATTGGCAACATTTCAACCTTGTGGATGCAATTCCAAATCCATCAA
GGAGCAACTAATTGACATTGTTCAGAAACACTTTATGTCTCAGCAAATGGATGAGCTTCAAGTTATTATGGGGTTTGTCCAAGCTGCAAAGAGA
GTGAAGAGAGCGTGCAAGTTGCAATCAAAAGAAGAAGCCAGAAACACTGATCTTAACTGCATCAGCTAAAAAGAAACAAGCCCTGACTTTTATA
ACACATCCTGTAAGTACAGTGATGCCAAACTTGTTTAACCAATTTGTGGCTTGCTGCAGCTAGTTTTAGCTCGTTCTGGAGATGTTTGGGTAAG
GAGTAGAATGTTGTTTCTTCTTGCTTCTTTGTTTAGCCGTGTAAAAAAAACCACTAAATGACCCTGATTCCAAGAAACATGACTCTCTAAAGCT
CCCAATTCAAATTAATCTATGTTCTGATATTTGGTTTGTTAGATTGTAAATATGTTTTAATATGACTTCTCGCCC |
Primers for UN49644 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TCTCGCAATGCATGATCTTC |
59.914 |
20 |
TGAGTGCATTCCTCTGCAAC |
59.992 |
20 |
183 |
55 |
237 |
| 2 |
TCTCGCAATGCATGATCTTC |
59.914 |
20 |
CTGAGTGCATTCCTCTGCAA |
60.136 |
20 |
184 |
55 |
238 |
| 3 |
TCTTTTGTTTCCCCCTGAGA |
59.641 |
20 |
TGAGTGCATTCCTCTGCAAC |
59.992 |
20 |
127 |
111 |
237 |
|
|
