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Simple sequence repeat (SSR)
>UN04677
GACCAACGTAGTTTCATCTGAAAACACCCCTTCTCTCTTTACGGCGGCGGATCGGAATTCATTATTGCCGACATCAAGTGAGCCTTGTAGAGAG
AGAGAGTCCGAGTGTTAATTCTGTTATCTCAGAGATTCCCAGTTTTAGGATGAAAAGAGTAGCTCTTAGACGGAGGGCAAGGCATATCTCGGTT
GTGCTTGTTGTTCTTGTTTGTGCAACCGTTGGCATATGGACATGGGATACAGCTCCATCCTCTGCCTTTCTTCCACCCCAAAGTCGCTTTCTTA
AGCTGCAAACAGAAGAAGAGGTAAGGAGAATACCTAGTGGACTGAATACAGAAACTGAAGGGAGCTACTCATCAGCTACTCCGTTTGTAAACAA
AGAAACCAAAGAGGATTCAACTATTGAACAAGTGGAACATGAAGTTGTAAGTGAGCCAAAACATGGGAAGACACCAACTAGCAGAGAAAAATAA
ATTAGAACAGGTGAAACGTGAGGTTGCTCTTAGAAAAGACCAAACTACAAAGACGACACCTATTAAAGAGACTCATTCAGATCCAGAGAGGACT
AAACAGTTCGTAGCCATGAAAGATGATGTTAGTACTTCAACAGCTCGCATCCCCAATCAAGCTTGTAATTACGCCAAAGGAAAATGGGTTGTGG
GCAACCACCGTCCTTTGTATTCAGGATCTCATTGCAAACAGTGGCTTGCTTCCATGTGGGCGTGCAGGTTAATGCAGCTTACAGACTTTGCCTT
TGAAAGGTTAAGATGGCAACCTAAAGATTGCTCTATGGAAGAATTTGAAGGCTCCAAGTTTTTGACAAGGATGCAGATGTCCTTGACGTAGGAC
CGGAGTTTGGGTTCATAACTCCCGAAGGTGGAGGTCGTCCTAATGGCTGGGCTTACAGATTCCCAGAAACCAACACAACGGTTCTATACCACTG
GTCATCGACCCTCTGCGACATACAACCGCTCAACGTCTCTGACCTTTTAACTGAACACGCTATGCATCTCGACCGCCCACCAGAGTTTCTACGC
CAATACCTTCATAAGATTAACGTGCTGGTTATGAACACAGGCCACCACTGGAACCGAGGGAAGCTCAACGGCAACAGATGGGTGATGCATCTGA
ACGGAGTTCCCAACGCTAACAAGAAGCTAGCCGCTCTTGGTAACGCCAAGAACTTCACGATCCACAGCACGGTTAGTTGGGTTAGCTCGCAGCT
CCCTCGCCATCCGGGTCTCAAGGCGTTCTACAGAAGCCTTTCGCCGAGGCATTTCGTGGGCGGGGAGTGGAACACTGGAGGGAGCTGTAATAAC
ACAACCCCAATGTCTATCGGGAAAGAAGTTTTGCAAGAGGAGTCTAGCGATTACAGCGCGGGTCATGCGGTGAAAGGCACAGGGGTTAAGCTTT
TGGACATAACAGCTTTGTCTCATATCAGAGACGAAGGTCACATATCACGGTTCAGTCTCTCGGCGTCAAAAGGAGTTCAGGATTGCCTCCATTG
GTGCTTGCCTGGTGTTCCTGACACGTGGAATGAAATGCTTTTCGCAATGATATAAGTTTTATAAGTTGCATTCTTTTTTGTATCAGGCAGAAAA
GTTCAGAGAAAGGGCTTGAGAGCCAAAGACCAGCCTTTTGATGTCTTCTAGAAGACACACATTTGAGGTACTAATGGCCTGAGGTGTAAGGTTT
AGTATTTATTCTGGTACAGAAGCAAAGCTTATTATTGTCGTAAACCATACATGAGATTGGTTCCGACCATATTTACAGAACAGAATCTAACTCA
ACTTTTGTCTTTTCAGTCTATTAATAGAATTTTTTTTTTCAGAATT |
Primers for UN04677 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CGGAATTCATTATTGCCGAC |
60.289 |
20 |
AGGCAGAGGATGGAGCTGTA |
59.973 |
20 |
203 |
53 |
255 |
| 2 |
ACCCCTTCTCTCTTTACGGC |
59.713 |
20 |
ACAACCGAGATATGCCTTGC |
60.103 |
20 |
165 |
26 |
190 |
| 3 |
ACCCCTTCTCTCTTTACGGC |
59.713 |
20 |
GCACAACCGAGATATGCCTT |
60.103 |
20 |
167 |
26 |
192 |
|
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