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Simple sequence repeat (SSR)
>UN49649
CGAAAACCTTGTTCTATTCTCTAAACTCTGTAGAAATGATATAATGTAATAACAAGAATCACAATAATTAACCGTAACCACCTCTCTCTCACAC
ACACACACAAAACTACCGAGTCTTGCTCGTCTTTCATTCAAGATGAAGCCGCTTCTGCGTCTTTTTCTTCTGCGTTTCCTTGTGCTGTGGCTTC
TTCTCCTTCAGCTTCACTGGGCTTTTCTGGTCCAGGTCCAGCTGATACTTTCACCATTGAAGGACGCAAAAGCCTTCCCCCTAGCAAGAAACCC
TTCCTGTATTCTTCAAGTACTATACCTTCTTCGTATTCTGCAAAATCCTCCCTCATTATTGCCTCATGAAGCATTGGATCAAACTGCTTGCCAA
CTGTCTCCACAGTGACCACACCAAGCGACCCCAGAATTTCCACAAACTGTTTGTATATGCTCTGATAGCTGTTAGTGACTTTCTCTTCTCCCTC
AGTCTCCACTTTAATCTGAGACTTAGCTCTCTCGAAATTATCCAAAACCGCCAAAAGATTCTCCACAACCTCTCCCTGAGCATTGGAAACAAGG
TTCAGCCTTTCCCTCTCTGTCCTCTTCCTGAAGTTGTCGAAATCCGCACTGATTCTTATCAGCCGATCCCTCTCCACAGTTAGCTCATTGGTTA
AAGATGCTACTTTATCCTCGAGGTGAAACTTTTCGTCTTCAATGGACTTCAATGATGCTTCTATCTCAGCAATCTTCTCCTCGTTGTTCTCTGC
TAAAGCTTCTTTATACGAATTCAGCAATGCCACGGTAACCGCCGCTTCTTCCTCAGAGCTAGTGTCTTCACTCTCAACACCAACAGCACCATCA
GTATCCTGGACTTGGGGTTCGTTGGATTCGACCTCAGTCTCCGTACGAAGTTTAGTGAACGGAGAGGATAGCCATCGGAGACAGAGCGGAGAGA
AGCAGCTCGGCGAGAGAGTGAGACGCTGCTGATGTTTCTTCCTCCGGCGAAGGAGACGCAAAAGGGCTTAAAGGGTACGGAGGGTGCATGAAGA
AGAGACGGTGTGAGCTGTAAAGACGGCGTTTTGAGTAGACCGGCCATCGGAGAGTTGGGTGAAAAGAGTTGGCGGCGAGGGATCCC |
Primers for UN49649 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TCACAATAATTAACCGTAACCACC |
59.131 |
24 |
AAAAGCCCAGTGAAGCTGAA |
59.993 |
20 |
156 |
59 |
214 |
2 |
TCACAATAATTAACCGTAACCACC |
59.131 |
24 |
GTTTCTTGCTAGGGGGAAGG |
60.068 |
20 |
222 |
59 |
280 |
3 |
TCACAATAATTAACCGTAACCACC |
59.131 |
24 |
GAAGGGTTTCTTGCTAGGGG |
60.068 |
20 |
227 |
59 |
285 |
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