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Simple sequence repeat (SSR)
>UN49653
CTCCAAGCAAAAACTTTAATGTTCAACACCACAAATGTAGTCCTCCCTACTAAAACACAACGGCAAAAAAAGAAAACCTAAAAGAAAGAAAAGG
AGAATCGTTCGCTGGGCACACGATATCGTCAAGGTAAATGGCACTTCAGTTGTTAGAACGCAGCAAAAGAAGAAGAAGGAACACCTCTCCCATC
TGGCATCTCGAATGGAATCTTTCTTTTTTTTCCTAATGAAAAGGTTTAGTGAAAGTGGGATTCAAGAAGAATGTTGGTGGCTGCATTGACATCA
TTTCTGGCGTGTACAAGGGCCTGTCTAGCTGCGTTCTGGTCAAATCCCATGGACACCAGAGTAGCTATTGCTTCCTCAGATGGCTCTATACTTG
ACGGCACCGGAGCTTGATATGATCTCACTGCTTGGCGACCTAAGCTGGGTGATGTCCTTGTTGGTGCTTGAGAATGGCTGCTCGAGGATGGCAA
AGACATTCGGGAAAAGAAGGAAGCAATGAACTCTGGAATCTTTGCCTTGCGGATACCAAAGATGTTCAACCGATACAATGAACCAGCAATTATG
CCGCAAATTCCAGGTAACATGGATCTTTTCCAAGATGATAGTAAAAGCTGGACACCAGCAAGATATATGAATGATTTATCAGAGAAGTGAGCGC
CAAACACATTGAACCTCTTTGTAACCGGAATGTCCAAGTAGAATGGTACAAAGGAAGCAAATATGAGGGCGTATGGTCCAGATGTCAGTAGGTT
TGCTGTAGGGTCTTTGAACAGTGATAACACAATGGTCTGTAGAATTAGTGATACAAACCCAGAGAACAAGATGAAAACCGAGTGCTTATTGGAA
CCAATCTGTCTCTCAAAGACACGGAAGTAGTAAAGCAGATAGACGCCAAAGAACAATTCAGGGGTGGAGGAGAAGGCGAAATTCGATTTGATTA
GCTTCCATATCTTGAACTTCTCGAAAATATCCTGGTAAGACAAACCGAGCTTGGAAGAGCCTCCTCCTCCTCCTCCACGGATCCCGAAGAAGAC
AGTGAAGAGGGCGCTGGTGATGACGAAGGCTCTCGTGACCGGAGCATTATTGAAACCAGAGGGACCTCCGTTCATCGTGTAATCGGATGAACAG
AAAAAAGTCAACAATCGGCGGAGGAAAGCTCGTCGATGATTGAATCTCTGGAACTGGCGATGGATGGATCGAGGGGTTTTTGTTTCTCTCTCTC
GAGTCGTGTCTTTCTTCGAAAGGAAGGATCTTTCAGTGATCTCTCGATGTCAGACTACCATTACTCTGATAATTAAGAGAAA |
Primers for UN49653 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
ACGCCAAAGAACAATTCAGG |
60.11 |
20 |
AATAATGCTCCGGTCACGAG |
60.096 |
20 |
197 |
889 |
1085 |
2 |
AAGACAAACCGAGCTTGGAA |
59.853 |
20 |
AATAATGCTCCGGTCACGAG |
60.096 |
20 |
109 |
977 |
1085 |
3 |
GAAGGCGAAATTCGATTTGA |
60.153 |
20 |
AATAATGCTCCGGTCACGAG |
60.096 |
20 |
168 |
918 |
1085 |
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