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Simple sequence repeat (SSR)
>UN49765
GGAGTAACAGAAACTACAATTTATCTAATCCCAACTTGGTTTTACAGCAGAAAAGAAAATTCGACCATAACACAAGTGAAAAATCAAAAATAAT
TTCAACATCTCGAAAACGTTCTAAAAACAAACTATTTTTAATTATCACGTCTCGGTTGCCTTTTGCGAGGAGCAGCGGTTTCTTCCTTCTTCTC
CGTCTCATCTTCACTCTTTGAGCTTGAGCTCTCTCCTACTTCTGATTTCTTCTTCTTCTTCTCCACAGTTGCTGCCGGCGCCGCCTTTTTGCCA
CCGAAGATAAGCTTGATGAAGAGCGAGAAGAATACTACGACAATGGAGACAAGAACACCAATGGTTAGGTTTGGTTGTTCCTCAGCTTTCTCGA
TCAGCTCGGTGATCTTAGACTTGTAGGCACTTAGGAAAGATATGTCTGCAACCTTGTTCAAGAGGTCGAACACAATCTTCTGGTAGCTCTTGAG
ACCACCTGCAGAGCTAGCAGCCTCCTCTTCCGCCTTTTGTTTCTCTTTCTCAACATCGAACTTCGGCTTCCAAGTAGTCTGTCTGTAAACCTCA
GCGACCTTCTCGTTGTTAAACTTCTCCCACTTTTTTCCATTAAACGCCTTATAAAACGGGACAATCTTTTCAGGTTCGGTAAGGTTGATAAAAG
CATATCCAACATTGCATTTGTTCTTGAAGTCAATTGGCAAATAAAGGAAATCATATGTTCCTTTACAGTGCTCGTCAATGGCAGATAGAAGCAT
CTTAGAAGTGTACTTGTTAGGAATGTTTTTAACCATCAATGTTGTCCTGTTATCATCCCCACGTAATATACGGTCAACATCAAGCTCATAAAGT
TTCTTGTCAGCGTTACTAGAGCTAGACTCGCTTCTACGGTGAGAGAGATTCCTGTATCGTTCATTCGGCGAGTCATACGAGCCAGGCATTGAAG
CCATTGGGCTCCTCCCGGGGAAGAGATGAGACAACTGTTGTGGAGGTCTCAGTACAGCATTTGGGGAATTTACATCCATGCGATTCCCAACAAC
ATGGGAAAAAGACTTGTGAGAACCGATTTCCATTGGATGTGAGGGTGAAGAGCCAGGAAACCCTATGCTACCATGAGAACCTATGTGGAAGCCA
GGAGATTCTAGAGACTCAGCTGCATAGGCTTGTCTTCTATCCCAGAAAGGCGAGTTCACTACCGGCGCAGATCCAATGTGGTGGTGCACAGGAG
AAGATGCCATATTCACCATAATAGGAGGTGCTCTAGGGAATACAGTAACAGGTGGGCGCTGAGTAGGAATGCTGTTGATGTGAGATGGCGAGTT
AGGCCACATCATGCCATTTGACGGGTTATGTTGCTGAGTATTAGAGTTGCTCCACAAGTTAGGGTTAGGGCGGCGGGAGCTTTGATTCATGGGA
GATCCTACGCCCCCTCCGTTAC |
Primers for UN49765 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
ATTATCACGTCTCGGTTGCC |
59.962 |
20 |
TATCTTCGGTGGCAAAAAGG |
60.067 |
20 |
157 |
135 |
291 |
2 |
ATTATCACGTCTCGGTTGCC |
59.962 |
20 |
GCTTATCTTCGGTGGCAAAA |
60.209 |
20 |
160 |
135 |
294 |
3 |
ATTATCACGTCTCGGTTGCC |
59.962 |
20 |
GCTGATCGAGAAAGCTGAGG |
60.24 |
20 |
247 |
135 |
381 |
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