Simple sequence repeat (SSR)
>UN49971
CATATGCCCTCTTGGCAAAAGAACGTACTCTTTCAGACCAAATCAGAACAGAAGTCATTTAAGAAAAGAAAGAGAGAAACAGGTCAAAGAAGAA
GAAGAAGACGCACATATTATGATGGCTTGTAGTATTTAGTGGCCACAAACGGCATCTTGGTGATGTTGCCTTCATAAGGTCTCCCACGGACCAA
GATCTTCACTTTGGTCCCGTTCTTGTGCTGACCTGACTTCACGTACCCCATGGCTACGTTCTTCTTCAAGTTGGGGCTAAACCCACCGCTCGTG
ATCTCTCCAATCTTGTCACCGTTCTCATCGTGCACCTCGCTATGCGAAGCAGCGGCGTGAGGCGGCTTTCTTGTCGGATTGAGCTAGACGACGG
GTTATGGATTGGCCTAGCTGCCATAGACTCCCACCTCTCATCTTCTCCTCCTCCTCCTCAACAAAGATTGAGACTTTGTGTTGTTTGCCTCTGG
AGAGATTCCTGAATCCTACTACTACCTTTGTAGTGTTGGTACAATTAACTGATGGTTCGGTAGTCC |
Primers for UN49971 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CACTTTGGTCCCGTTCTTGT |
60.005 |
20 |
CTCCAGAGGCAAACAACACA |
59.873 |
20 |
278 |
195 |
472 |
| 2 |
GCTTTCTTGTCGGATTGAGC |
59.962 |
20 |
CTCCAGAGGCAAACAACACA |
59.873 |
20 |
126 |
347 |
472 |
| 3 |
GCTAGACGACGGGTTATGGA |
60.096 |
20 |
CTCCAGAGGCAAACAACACA |
59.873 |
20 |
108 |
365 |
472 |
|
|
