 |
Simple sequence repeat (SSR)
>UN50033
GCTTAAATAAAATATATTGTCGTCAACCTTGACTTTATCAGATGGAGATTCATAGGAACATAAGACTTCATACAAATATTAAAAAGAAAAAAAG
AAAAAATAAACTGAGAATGATCTTAAGAATCATTACATGACGAGATGAATCTTTTTAACAAGCCAGAGTAAAGGAGTTTCTTGAGAACACAGAG
AGTTCACAACTAGAGAAACAAAGAAACACCATAGAGCGAGAGTTGCACAAAGTTTTGTTCTGAGAAAGAGAATCTTTCTTCAACACAAGTTTCA
TCTTGGAGACGCTTCCACAGATCTGGACCTGGATCCTGATGGAGACCTTGAAACCTCTCTTCCACCACGACGCCTTTCCTCTGGTTCATAGTCC
GGTTTCCTGGTAAAAAAAAAAAGGACCAATCAATGTCCCAAACAAGAAAATCAGACACAGTCAATCCCCAAGAGCAATAACAAAATAAGCTCAC
TCTCTAGTCTCATTGTCTCCATTTGTGTCTCGGTCTTCAGCAGCAGTAGCAGCACCTTCATAGCCAGGGGAATAGGACCTGCGACTGTACTTTG
CATCTCCTTCTCCTCGAGGAGGACTTCTTAGTGGTGATCGTGGACGTTCCTCTTGTCTTCTCCTTGGTGATGCTGAATAGTCTGCTCCTCTTCT
TCTAGGTGCAGGTGAGTAAGACCTTGATCGGCGTCTGCTTCTAGAATCCGATGGACGACGGGGAGAGCGTGATCTAGAGATTGAACGTGAACGA
GACCGTCCATGAGAACGACCTCTAGAGCCAGAAGGTTCCCTGCTACGAGTCCTAGTCTTCACACGCATCTCCTCAGGTCTTTTCCTGGACTCTG
AAGCAACAACCACGGTTATCTCTCTTCCACCAAATACTCTTCTGTTCATGCTTCTTTGAGCCTCCCCAGCATCATATGCATCGACAAACTCCAC
AAAAGCAAACCCCCGAGGTTCCCCTGAGTAATAGTCTCTGGGGATATAGACATCCCTCACAGGACCAAACCTCTCAAAGGGAACACGAAGCTCT
TCTGGTCTGCAATCGAGAGGAACGTTTCGAACCAAGAGACTTCCATGGCTAGATCCCTTACGTCCACCACCACCACCACCACCACCGTATCCAC
GTCGCGGAGGAGGAGGAGGGCTTCTGCCACGACCACCGTATCCTCTCCTCGGAGGACTGTAATAAGGCGGACTGTATCTCCTACTCATCACTGC
GACGACGGAGTAATTGAGAAGACGGACAGATCTGAAGTGAACCCCTAAAGCTCTTCTCTTTACAGAGAGACCC |
Primers for UN50033 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GGTCTGCAATCGAGAGGAAC |
59.81 |
20 |
CGTCGCAGTGATGAGTAGGA |
60.008 |
20 |
189 |
1038 |
1226 |
| 2 |
GGTCTGCAATCGAGAGGAAC |
59.81 |
20 |
TCGTCGCAGTGATGAGTAGG |
60.008 |
20 |
190 |
1038 |
1227 |
| 3 |
CCTCTCAAAGGGAACACGAA |
60.224 |
20 |
CGTCGCAGTGATGAGTAGGA |
60.008 |
20 |
217 |
1010 |
1226 |
|
|
