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Simple sequence repeat (SSR)
>UN50034
GGGGGATAATAACTTTATCTTAAAAAAGAATTCATATCAATACACTCAGTCAGGTGTACAAGCATATTGACAATGACAGTGATAAACAATCTTA
CATTTAGAATTCAAAAAAAAAAAAACTCTTGGGGGCAGAAAAGCTTCTCTACTTGAAATAGAGTGGGACCAGTTTCTTCAAGGTTTCAAACACA
CTTGTGAAGGGATCAAACTGGACTGGCTTTCTTAGTTCAAGATCTGGAAACTGGTTTGTCAGCGTTTTCTCCATACCTGGCATGGACATCATAG
CAGCTAACTGACCATCAGACATCACTTCACAGTCCTGTGGAGTATCCTTTATTTTCTCCGGGTCGTACCCAAACTGCCCCAAATAGTCTTTGTA
CTTGGGGATGAAAGGAATGGTGGGAAACCGAAGGTAACATTTCTCTTTAATCATCTCTTGCTTTTCTAAGTAAGTCTCAGTTTTCTCCAGGTCT
TGTGCTCTAACGCATTGAACTTTTCCTCTGATTCCTGTTATATACCCATCAGGGCTACCGTGAACGCAAAACGTGTCTACCCTTATAGCTGGTT
CCTTCATATCAAACGTGTATACTCCCTGTGTGCAATGGCAATCTTCTTGGCCTTGACCAGCAAAGCCACGCTTAAGAGAAGCTACTTCAAACCA
TCTTCCAGAGTACCTAACTGGGTCAAAGTTCTTGGCAGTCATGCCTCTCATCATCATCATCATCTCTTCCGGGTCACTATCAAGTGGAAGAGTA
AGCTTGTTTTCTTCCACAGCAGCACTTCCCAGTTGACAAATGTTGTGATCCCGACCTGATGAAAGATCCAATGCAACACCCTGGTCTGCCTGAG
AGAGAAGCAAAATGGTAGCAAACCCTGCAACAAAATGCTTTCTCAAAGTCTCCTTGCTTTCAATGGGATTCTCCAAGGAACATTTTACTGTTGA
CTTCTTCAAAACCCCTTTGGAATTGTGAGATCCACTGTTGATCCTTCTAACCGCAAAACTTCTCGTATTTGCAGGTCGAGTGAAGCTCTGGGGA
AGAACTAGAGTCGTTGACAGGCTAGTTATGATGTTAC |
Primers for UN50034 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
AACGCAAAACGTGTCTACCC |
60.037 |
20 |
TTGTCAACTGGGAAGTGCTG |
59.873 |
20 |
259 |
533 |
791 |
2 |
GCAATCTTCTTGGCCTTGAC |
59.82 |
20 |
GTTGCAGGGTTTGCTACCAT |
60 |
20 |
276 |
602 |
877 |
3 |
GCAATCTTCTTGGCCTTGAC |
59.82 |
20 |
GATCTTTCATCAGGTCGGGA |
60.011 |
20 |
219 |
602 |
820 |
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