 |
Simple sequence repeat (SSR)
>UN50094
ACCAAGCCACAAGAAAGATTTGTGCATATACCAGTCAACACCAAGCAAGATTCGATCACACTAGGAAACCCGAACCGGAAACTCAACCATTGGC
CAACCATCATCCTCTTCATTATATGCGTCATCACAGGCCAACCCATTGCTAAAATCCTCGAAAACTACTACAACGACCAAATCGACCACACCGA
AAAACGTCAAAACGACGGCGTTTGGACGCAATCTCTCCTCCAAACCGTTGGATTCCCTCTCCTTCTCCCTCTCTATATCTTCACCGCCAAGAAA
CACAACCCACAACAATCTCAAACCACTAGTTCCGACCGAACCTCAACCAAGTACATAATATCTTTCTCCGGTCTGATCGGAATCCTCTGGTCGA
ATCAAGGAAGATTCTCCGCCAAGGCAAAGCTCGAACTCCCCATTAGGGTTTTCACGCTGATCTACACGACGCAGCTCTTCTTCACTCTCATCTT
CGCCGCCTTCATCAACAAACTCAAACTCAACCGATGGATCATCACCTCATTGATCTTGGCGATCGCCACCGGAGCTCTCACCTTCTCTTCCTCC
TTCGCCGGCGAGCCCGACGACGACGAAGCAGAGGTGGATTACCGAAGAGGCTCGCTGGCTGCTCTAATCTCTAGCGTATACTTCTCTCTCCTCC
TCTGCGTCATCCAAAACGTATCCAAACGAACAGAACCAAACTTCGCCTCCGTTTGCAGAGTCCTGATCATCTCCTCCCTAGTCGCTACCGTAAG
CTCGGCCGCGGGTCTTCTCATCGAAGGCGAGCAAGAGGATTTGAAGAGGGAGATGAACGGGTTCTCGAAAGGGAGAGGTGCGTGCGCGATGGCT
ATGTTGGGTCAAGCCGTTGCGTGGCAGGTTTACTGGGTCGGGATCGTGGGACTCGTCTTCTCCGTGTCGAGCGTGTTGGCTAACGTGATCAGTG
TCATCACGTGGTCGGTCGTGTCGGTGCTCGTTGTGATATTCTTTGGTTACGTGGACGATGAGTTTGATGTCTTCAAAGGTGTCACCTTGATCAC
AGCCTCCTTGAGTACCGCCGCTTATTTCTATAGACTTCACAAAGAGAATCGTAACTGTAACTAGTAACTACTGACGTGGTGGTGATCTTCAGGA
GGTTACTTTTTTAATTTTCTCGATTTTATTTGGTAAAATTCAAACTGTATTCGTTTCTCTGTTTTTTTTATTTCTAAAATTTATACTCTGTCCG
TTGTAGCTACATTGTAAGTTCTGTATCTGTATACTTGTGTTACAGAAAACAACCTCATGAAAGATACCTTTTCACATTAGAGTTCAAAAGTTCC
AATCTTTTACCTGTTCAAAAAGAAAAGTTCCACTTTTTTTTCTAGTGTTAAAAAAAAAGGATCCAATTTTTACAACCTTTTTTTCTTCTGATTT
TCTGATGATGCCTTTTTAGTCTTTACTGAGCATCCTGTTGTGTGTGCCCGCCCTTCTCAAACACATTTCTTGTATTCTGGTTTAAGCTCGTAAG
CACGACCACTCCTTGAATACACACAAAGCTCTTTGAGTATCTCTTTCAAGAATATCTCTGGTTGGTTGGTTTTTTGAGCAAGCTGTCTCAGTGT
CCATCTCGGTTCTCTTTCAAATAGTTGGAACACTTTCGCTTCCACCTCACTACGATCGCTTCTTGTCCTCTTTTCCCTTCGCTTATTAAGCTTC
TCTGTCACCACCAATGCAGGCGTGGGCGTCAAGTGTTCTCCCCGGCAACCATCAAGAACCTGAATATGTCTATTTTCAGCCACCGGTTTCATGT
TCCTCACACGTAAAAGCTTTCCGTATTCTTCAATGCAATCATGAGGTCTCATATCGAGTTTATGCGTCACCGTTCCTTCCACCTCAAGTTTACC
TTGATTTGATTCGGAGAAGATACGCACTGGACCAACAAAGTCTTTGGATTTGTTTACAGAATAGAGCTTCGAAATGTTCTGTAGCTCAGCACTA
GCCATCTCCATTCTCAACCCAGGCGACAAATCGGGACGCAGGAGATTGAAGGATTCGCTATACTTGGCCACGAGACCAAGTTCCTGAGAAAAGG
AAGAAGACGAAGAAAGTTGGCGCCACGCCTTGTCGACCCTTGGTGGACACTTCATTAGCAAAACCATCTCGTCGGCTTTCTCCGTTTCTAGTTC
TTGATATTCTTCTTCCACCGCTAGTTCCATCAATCGTTCTATCTCGTCTGCAATAATCTTCTCGTCTTCAAGCTGTTTCTTTCTCTGGATCTTC
TTCTTCTTCTTCGGCGTTTCAGATATCCCCATTGTTTCTTTCTTGTTCTGCGAAAGCGGGAAGAGAGAGGTGACTGAGAGTACCTTTATAGTGT
TTATACCC |
Primers for UN50094 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GAAGACGAAGAAAGTTGGCG |
59.993 |
20 |
CAGTCACCTCTCTCTTCCCG |
59.978 |
20 |
262 |
2071 |
2332 |
| 2 |
GAAGACGAAGAAAGTTGGCG |
59.993 |
20 |
ACCTCTCTCTTCCCGCTTTC |
59.957 |
20 |
257 |
2071 |
2327 |
| 3 |
CCACCGCTAGTTCCATCAAT |
59.955 |
20 |
CAGTCACCTCTCTCTTCCCG |
59.978 |
20 |
156 |
2177 |
2332 |
|
|
