 |
Simple sequence repeat (SSR)
>UN50117
ATTCACCATCTCTCTTTTCTTGATTACCTATTAGCTCAACCAATAAAACCAATATTAGTAACAATCACAAACTATCATTGTGATCCTGTGTTTT
CTCTATCAATAACACACACAAAATGTCAATTTCTGTTTGTCAACCTCAGGAAAAAATCGTCACCAAAAGTTTCTCCCAAAAAGGAGACATGGGT
GGGTTGAGTTTCCTGCAATCTATGTCCGATATCACTGCCATTGTCCGAAACAGTGAGGATAAAACCTATGGCTATGTGCACCCGACAGAGAAAC
GCTCTGTTTCTAAGCTGAATGAGAAAAGCCTAGAGATGTGCACTGAGAGTCTTGGAGCCGAAACAGGAAGCGAGAGTGGTGACGAGTTGTCCTT
ACTTGCGCTTGAAGCAAACGCTATCTCTAGGGCTCATTCTCTTTCTCCTAAGCCGAAACACCAAGAAGAGGAAAAGGACACTGACTTTCACGCC
AATAAATCAACGATGAGTCGCAGCAAAAGTTTCCCACCACCGATAAAGTTCGTTAAAGAATCAAGGTATAACCGTATGGTGAGGTCGTTAGGAG
AAGATGGTCGTGTCGTTGTTCATGCAATCAGGTCTTCGTCTCCGCCCCGTTGCTTTGTAGCGGAACGTGAGGAAGGAAGGCTCCGTCTCTGTTT
ATCGCCGGAAAGTTCTTTACTTAGGGACAATCATGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAACAGAGGAGGGCATGGCCGAGGAGAAT
AATGAGAACTTGGAGGGTAAAAATGGAAATAAAAAGATTAGCAGGCTAAGCAGCAGATGCAAGGAGAATGGTCGTGAGCCTAAACCAATGCTTA
CTTGGAAGCAGCAGCAGTTTTGGGTCGCCACTTAAAAGGCTTCATTAAGCTTCTAATCAAATAATTTTAAAATATGAGTTTCTTAATTTTATAA
TGTATGCTTTTGTATGATTTCTCGAGGGTACTGGGAGTTGTTTTCCAATTCTATTTGGTGTAGTGTTAAATGAGACTTTGTTATTATGATAATG
TTTCTTCTTATTATTATTTTAGCAGTCAGCAACAAAAGCTGAACATGTACC |
Primers for UN50117 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GCTCCGTCTCTGTTTATCGC |
59.985 |
20 |
TTTAAGTGGCGACCCAAAAC |
59.975 |
20 |
239 |
644 |
882 |
| 2 |
GCTCCGTCTCTGTTTATCGC |
59.985 |
20 |
ACGACCATTCTCCTTGCATC |
60.081 |
20 |
184 |
644 |
827 |
| 3 |
GCTCCGTCTCTGTTTATCGC |
59.985 |
20 |
CTCATTATTCTCCTCGGCCA |
60.17 |
20 |
115 |
644 |
758 |
|
|
