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Simple sequence repeat (SSR)
>UN50118
GGCAATTGAGGAAGGAACACAGAGATCTCGATTCACAGATGTCGTCGTCGTCGTCGTCGTCTTCTCCGAGTGGCGATTTGAGCGAGAGAAGAGG
GATTCCCGCCGCTAAATTCATCCAAGATGTCGAGACTTACCTCTCTCAGTCCAGCCTCGATTCCAACTCTGCTCTCGCCTTCCATCAAGAAAGG
GTTCAGCAGTATAAAGTTGTTGAAATGAAGCTTCTTGCCCAGCAGAGGGATCTTCAGGCTAAAATCCCAGATATTGAGAAGTGCTTAGAGGTTG
TTGCCACTTTGGAAGCAAGGAAGGGTACTGGTGAGGCCCTTCTGGCGGATTTTGAAGTGTCTGAAGGAATATATTCACGGGCCTGTATTGAAGA
CACCGACTCAGTGTGCTTGTGGTTGGGAGCAAATGTCATGCTGGAATATTCCTGTGAAGAGGCTACAGCCCTTTTGAAAAACAATCTGGAAAAT
GCTAAAGCCGGCCTGGAGGTTCTTGTGGCTGATTTGCAGTTCTTGAGGGATCAAGTCACAGTTACTCAGGTGACTATTGCGCGTATCTATAACT
ATGATTCAGCAAAGGAGGGTTAAACAAGTTACCCCTACTGCTATTGCTGCTGCCGACTCATGAATCACAAAGTTCAAATCATGCTCTTGTGTCT
TATAAGGAGGTAATATGATTTCTGCGACACCGTTTGGTTTGTAACTCTTGTTTTTTTTTTTGCTTTTCTTGATCGAGCTGTGTTTCCGAGACAA
ACCTATCAATAGAAACATTTAGCATTTTATTGTTACCTTTTGGAGTTTGGAGACCATCTTGTGTTTTTTTCCGATTGAAGTACTACTACTTGTT
TAAGGATGTGGTCAGTATATCATAGTGTTTGC |
Primers for UN50118 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GGCAATTGAGGAAGGAACAC |
59.532 |
20 |
GAGCAGAGTTGGAATCGAGG |
59.95 |
20 |
168 |
1 |
168 |
2 |
GGCAATTGAGGAAGGAACAC |
59.532 |
20 |
CTTTCTTGATGGAAGGCGAG |
59.948 |
20 |
187 |
1 |
187 |
3 |
GGCAATTGAGGAAGGAACAC |
59.532 |
20 |
GGAATCCCTCTTCTCTCGCT |
59.919 |
20 |
100 |
1 |
100 |
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