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Simple sequence repeat (SSR)
>UN50124
GGGTCGCGTAAAACCCTAATTCCCATTTCCCCTCTTTCAACCATGGCGACTCCTCCGAATCTAGAGTGCCGGATGTACGAATCCAAGTACCCCG
AAGTCGACATGGCCGTAATGATCCAGGTCAAAAACATCGCGGACATGGGAGCCTACGTGTCACTCCTGGAGTACAACAACATCGAAGGCATGAT
CCTCTTCTCCGAGCTCTCCCGCCGTCGGATCCGGAGTGTGAGCAGCTTGATCAAGGTCGGGAGAATCGAGCCCGTCATGGTCCTGCGTGTGGAC
AAGGAGGAGGGGTACATCGATCTGAGCAAGCGCAGGGTTAGCGAGGAGGATATACAGACTTGTGAAGAGAGGTATAACAAGAGCAAGCTTGTGC
ATTCTATCATGCGTCATGTTGCCGAGACGCTTTCTATTGATTTGGAGGAGTTGTATGTGAACATTGGTTGGCCTTTGTACCGTAAACATGGTCA
TGCTTTTGAGGCTTTCAAGGTCTTACTGACTGGTCCTGATTCTGTGCTGGGTTCCCTCACCCGTGAGATCAAAGAAGTTGGGCCTGATGGGCAG
GAGGTGACCAGAGTTGTACCTGCTGTTACGGAAGAGGTGAAAGATGCGCTTGTGAAGAACATTAGGAGGAGAATGACACCACAGCCAATGAAAA
TCCGTGCTGATATCGAATTGAAATGTTTTCAGTTTGACGGAGTTGTTCACATTAAGGAAGCCATGAAAAAGGCTGAAGCTGCTGGAAACGAAGA
CTGTCCTGTTAAGATTAAATTGGTTGCTCCACCTCTCTATGTCCTTACTACTCAGACTCTTGACAAGGAACAAGGGATTGAAATTCTAGAGAAG
GCCATAGCAGTTTGCACTGAGACAATTGACAAACACAAAGGCAAGCTCGTCGTTAAGGAGGCACCTAGAGCTGTGAGTGAAAGAGATGATAAGA
TGCTGACAGAACACATGGCTAAGCTAAGAATGGACAATGAAGAAATCAGCGGGGATGAAGAAAGTGGAGAAGAGGAAGAAGACACGGGGATGGG
CGAAGTTGATATCGATGGTGGCGCAGGAATCATTGAGTAGTCTTTTCTTTTTAAGTAGAACACCACCAAAAAGATTTGTTTTTTGTTGTTGTTG
TTGTTGATACAAATGTTCTTTCACCCGTTTGAGGGGTTTTAAGTATCAAACATTACATTCATGATCCTATAAAGGTTTGATTATTTTTTGGGTC
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Primers for UN50124 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
ACAATGAAGAAATCAGCGGG |
60.074 |
20 |
CCTCAAACGGGTGAAAGAAC |
59.569 |
20 |
189 |
974 |
1162 |
| 2 |
CGTCGTTAAGGAGGCACCTA |
60.262 |
20 |
CCTCAAACGGGTGAAAGAAC |
59.569 |
20 |
269 |
894 |
1162 |
| 3 |
ATGCTGACAGAACACATGGC |
59.714 |
20 |
CCTCAAACGGGTGAAAGAAC |
59.569 |
20 |
223 |
940 |
1162 |
|
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