 |
Simple sequence repeat (SSR)
>UN50138
GAACCCCAAAGCGTCTCTCTTCATCTTCTTTCTCTTTCGTTTTTTTCTTAAATCGAAAAACCCTTCGATTATAATTGGATCTATTCTTCTTCCA
ATTCTTCATAAACGTCCCAAAGAGGATAAAGTCTGTTTCTTTCTGCAGAGAATCCTCCTCTCAGCAACTGGGTTTTTGAAGTTCTCTACGAAAA
TTGATTTGGGTTTTCGTGAGGTTGAATTGGTGAAAAAGAGCCTATCTTGTGTTCGATGATATTCCCCAGCGAGAGAAAAGGCGAAGACTTTTGA
TTCTTTTTTTGTATTTGTTTTGTTGGAAGAGAGAGAGAGATGGCAGGTGGTGAAGATTGGATAGAACTCAAGTTTAGACTCGCAGATGGCACTG
ACATAGGTCCCACCAAGTACAATCAATCCATGACTGTTTCTTCTCTCAAAGAGAAGATCATCTCTCAATGGCCTAAAGAGTCAGAAAACATTCC
AAAGACTGTAAATGATGTGAAGCTCATCAATGCCGGGAAGATACTAGACAACAACCGGACACTTGCTGAATCCAGGCTTCCCGTTGGCGAACTT
CCCGGAATGGTCATCACTATGCATGTTGTTCTTCGCCCTCCTACTTTAGACAAAAAGAGCGAAAAACTGCAGAATGATCCTCCAATGAAGAATC
GATGCGCATGCACCATTTTGTAGCTGCAAGTAAATTGGATCATATAGAGAGATTTTAATCCTTCATGATAAATGGCACTGGGTTGTGATGCTCC
ATGGAACAGGTGAGAAAGTTCCCTTACAGGCATAGACATGAAAAAACAAAGGATCTTCACTACAGAACTTGTTTACATTTGTGTGGTTGATAGT
TTATTTTTCATCTTTTCTTCATTGTTTATCCAAAATGGCTCAAGAAAATGTACTACAATTCTTGAAGGATGTTTGGTTTTTTTAAATATAATAC
AATACGTGC |
Primers for UN50138 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GATGATATTCCCCAGCGAGA |
59.998 |
20 |
CAGTGCCATCTGCGAGTCTA |
60.16 |
20 |
134 |
243 |
376 |
| 2 |
TCGTGAGGTTGAATTGGTGA |
60.088 |
20 |
CAGTGCCATCTGCGAGTCTA |
60.16 |
20 |
175 |
202 |
376 |
| 3 |
TCCTCTCAGCAACTGGGTTT |
59.844 |
20 |
CAGTGCCATCTGCGAGTCTA |
60.16 |
20 |
227 |
150 |
376 |
|
|
