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Simple sequence repeat (SSR)
>UN50171
TAGTTCATCATATGGTTCAGCTCTTGCTCTTGAAAGGAATGACTCTGATGACAAGCTGGTGATAGAGTGCTGCTAGAGCTGCTCCAATGAATGG
TCCAACCCAGAAAATCCAATGGTCGTCCCTGGAGTGCTCCTTGTTGTAGATAATGGCAGCTCCAAGACTTCTAGCTGGGTTGATTCCGGTTCCG
GTTATCGGAATTGTCGCCAAGTGTACCAAAAACACTGCAAACCCGATTGGAAGTGGTGCCAAAATTGGGACGTGTGAGTCACGGGCGCTTCTCT
TGGCGTCGGTGGCGGAAAAGACCGTGTAGACGAGTACGAAGGTTCCAATAATCTCAGCACCGAGACCAGATCCCTTGGAGTAGCCGGGAGCGAC
GGTGTTAGCACCGCCACCCGAGAGTCTGGTACGGCGTTGGCTGGAAACCCTTGACGACTCCGGCACCACAGATGGCTCCGAGACATTGCATAAT
CACGTAGAAAACAGCTCTGGTCAGAGACAACTTCCTAGCCAAGAACAGACCGAACGTAACCGCAGGGGTTGATGTGTCCACCTGAAATTCCAGC
AGTACAGTAGACGAGAGCAAAGATCATGCCACCAAAAGCCCAAGCGATGCCTTGGATTCCAACAGAGGCGCACATGTTTGGTGCTCTCTTCACT
CCCATGACTGTCAACACTGTGATGTAAAGGAAGAGGAAAGTAGCTATGAACTCGGCGATTCCTGCTCTCCAGAAAGACCACGAGCTCAGCTCTC
TCGGCTCGAACAGTGGCGCAGGTGGTGGCTCTTTGTAGTCCTTGTCGGACTGAGCCGATGTTCCGATGGGCTGCCTCTCCGGGAACTTGTTAGC
TCCAACTCTCACATCTTCTTCTTTGCCTTCCATATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCTCTTTCAGAGTTCTTTCA
CTCTAGAAAGGTTAAAGCGGTGAGCTTTTTACTTCTTCTTTCTTGTTTTGTGTAC |
Primers for UN50171 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TCCTGCTCTCCAGAAAGACC |
59.53 |
20 |
GCTCACCGCTTTAACCTTTC |
58.976 |
20 |
248 |
718 |
965 |
| 2 |
CCTGCTCTCCAGAAAGACCA |
60.523 |
20 |
GCTCACCGCTTTAACCTTTC |
58.976 |
20 |
247 |
719 |
965 |
| 3 |
GCTCTCCAGAAAGACCACGA |
60.533 |
20 |
GCTCACCGCTTTAACCTTTC |
58.976 |
20 |
244 |
722 |
965 |
|
|
