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Simple sequence repeat (SSR)
>UN50180
GGATCACTCACCACCGGATAACTTCCGTCGTCGTCGTCGTCTTCCGCCGCAGGCTTTTTCTCCATGGCCGGCGTAAATCTACATCTCCGTCACT
CCGTTGCTCAATTGATTCCAGCTGTTTCTTCTTCCCCTCCTCCTCCTCAGCGATTCCAGCTCGGAATCTCACCTTCTCGTGTTCTCTTCCCTAA
TCTCCGAGCTAACTCCCCCGCCGCCGCTCTATCCCTGCGAACCACTCGCCGTTCGAACACTGTTTCCGCGTCTCCCGTCGGTTCTTCCACCTCC
TCGGATTCGTTGGCGGGAGATGGAGACGAAGCGGGAAGGAGGACGCCTTTGCTCGAGGTGAAGGATCTGAGAGCTGTGATTGTTGAATCGAGGC
AGGAGATACTAAAGGGAGTCAACTTGGTTGTCTACGAAGGAGAGATACACGCAGTGATGGGGAAGAATGGTTCAGGGAAGAGCACATTCTCTAA
GGTTCTTGTTGGTCATCCTGATTATGAAGTGACGGGAGGGAGTATTGTATTCAAAGGGCAGAATCTACTTGATATGGAACCTGAGGAAAGATCT
CTTGCTGGCTTGTTTATGAGTTTCCAGTCCCCAGTTGAGATCCCTGGTGTTAGCAATATGGATTTCTTGAATATGGCTTTCAATGCTCGCAAAA
GGAAGCTTGGTCAGCCAGAGCTTGATCCAATCCAGTTCTACAGCCACTTAGTATCTAAGCTTGAAGTCGTGAATATGAAGACGGATTTTCTGAA
CCGGAATGTGAATGAAGGGTTTAGTGGTGGTGAAAGGAAACGCAATGAGATTCTACAGTTAGCGGTCCTCGGAGCCGAGTTGGCTATACTGGAC
GAGATAGATTCAGGGCTTGTGAAAAGTTCAGCGACGAAGAAGAGGAATCTGAGTTCAAGGCTAGAACAAGAACCACCACAACTACTCGTGTTCA
AAGTAGAGGCAAGGATTATGTTTTTTGCTTAAAGCAAATCCCTTTCTGTAACTTTATGTGCCTTGGAGCTATGCTAATAATATCTACCTTTGCT
GT |
Primers for UN50180 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
| 1 |
GGATCACTCACCACCGGATA |
60.747 |
20 |
GAAGGTGAGATTCCGAGCTG |
59.95 |
20 |
170 |
1 |
170 |
| 2 |
GGATCACTCACCACCGGATA |
60.747 |
20 |
CAGCTGGAATCAATTGAGCA |
59.948 |
20 |
118 |
1 |
118 |
| 3 |
GGATCACTCACCACCGGATA |
60.747 |
20 |
CGAGAAGGTGAGATTCCGAG |
59.943 |
20 |
173 |
1 |
173 |
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