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Simple sequence repeat (SSR)
>UN50191
GGAGTTTCTCCAACCTCTTTCATCTCTTCTAAGCAACCTACCCAAACAACATTACATAAACCTAAATCTCTCCTTCATGCATTTATAGCAAATC
ATCTTTTGCTTTAAGCAACACGCTCACACACACACAAAAATCAGAGCGTTTCTCCCCGTCCTCTATTCTATTTGTACTTCTGGTCTCACTTTAA
AGATCAAATACGTAAATATAAGTTGAGAGATTTTTGCAGTGAAAGATATGTTGGAAAGTCTTGTCTCTCTCGAAAGCATGTCCTTGAGCTCCAT
GGATGTGTCTGTACTTGAAAGGCTTAAATGGCTGCAACAGCAACAACAACAACAACAACAACAACAACAAGTTCTGAGCAGTACTAATGCTTCA
CCTGAACTTCTTCAATTCCATGGAACCAACAATGATGAGTTGTTGCAGAATACCTTCAGCCATTTTCAAATGCTTAGATCTGGTTTTGGACCAA
ACTATAGCATGGGTTTTGGTCCTTCACATGAACCTATGGATGGCTGCATTTCAAGAACAAATAGCTGCCAGATGGATCAAGCGGATACAGTGGG
GGTAATGTTGAAGAACAGTGAAGAAAACATTGCTTTTTCCTTGAAAAGCAAGAGAAAATCAGAGGTTAAGACAAGGGCAGAGGAAAAGACAGAG
AAGAAGATCAAAGTAGAGGCTGAGACAGAGTCAAACATGAAAGTAAAATCAAACTTGAGTAACACAGAGGCATCTTCAGAAACTTCAAAGCAGA
CATCAAAGGGAGCTTCAGAGATCCAGAAATTGGATTATATCCACGTGAGAGCTCGTCGAGGCCAAGCTACAGACAGACACAGTTTAGCAGAAAG
GGCAAGAAGAGAAAAGATCAGCAAGAAGATGAAGTATCTGCAAGATCTTGTCCCTGGATGCAACAAAGTTACTGGAAGAGCTGGTATGCTTGAT
GAGATCATTAATTATGTTCAATCTCTCCAGAGACAAGTTGAGTTCTTGTCGATGAAACTGGCTGTCCTAAACCCAGAACTCGAGCTTGCTATGG
AGGACTTATCTGTAAAACAGTTTCAGGCTTACTTTACAAATCTTCCTGTATTAGTTGCTTCAAAGCCATCACTAATGGTTGATGCGCCATTGTT
TCCGCTGGACCAGCAAGGATCTCTAGATTTATCAGTGATAAACCCAAACCAAGCAACATCTATTGAAGCTCCATCTGCAAGCTGGGAAACTCAG
TCACAGAGTCTCTACAACACATCTAGCCTCGGATTTCAGTACTAAAAAAATATTCGTTGAAGCAATGAAGTTGACATCATCAGGATCAGATTGA
GAACCATATTCCACTTTATATGGTGATAAATGTGACAACTACGTGTTCATGGAATATTTTTCAGCTTTTGCATTATCTTTTGATCCTTGTTTTC
TGATTTAAACCAGAAGAACTGGAGACAGCAATTTAGTGGTCTTGTCACCATCAATCTTTGTATAAATCTTGGTTTATAAGATAATATATATAGA
GAGGGAAGAAGAGT |
Primers for UN50191 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
AAGCAACCTACCCAAACAACA |
59.526 |
21 |
ATGGAGCTCAAGGACATGCT |
59.834 |
20 |
252 |
31 |
282 |
2 |
AAGCAACCTACCCAAACAACA |
59.526 |
21 |
ATAGAGGACGGGGAGAAACG |
60.455 |
20 |
130 |
31 |
160 |
3 |
AAGCAACCTACCCAAACAACA |
59.526 |
21 |
AGCTCAAGGACATGCTTTCG |
60.538 |
20 |
248 |
31 |
278 |
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