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Simple sequence repeat (SSR)
>UN50302
GTTTTACCATATGTTCAAATAAATCATGTATTCCAACTGTTCTTAAATAGAAGAGATTATTGTGGAGTTTTATGCATAACTCTCATATAATGTA
TGAATAGACTATAAAACACATCTTTAAAAAGGATACTACTTGTTATACATACTGATGTTGATTAGTAACAAAACTTGCCCTAATCTCCACTTTC
CAACGCAGGCAGGTATAATGATATTTGTCCTCACTCCTTTTTTGATACGAGACTGATTTTCTTTCCCTCCACAATAAACTTGTCACTTCGCTCC
ATCTTAAGTTTCAAGTAAGCAATAGCATCTTTCCTTGAAGAGAACTCTGAGAGAATTGATGGTGCTTGTTCATCAATCATAGATTTAAGCTGTT
TCAGCTTCATTGATCCGCTACTACCAGCGACCTTTTTAAGAATCTGTTTGCATAGGTTCTTCAACTTGATTTTGGGTTCAATGATTTCATCACG
CTTCCTTTTCGTTGGGAGAGAGTTTTCAATAACAGAGTCCTTGTCGTCTTCTTCTTCACTCTCTTCTCGCTTCCTTTTTGCTTGGACAGAATTT
TCGATAACAGAGTCCTTGGCATCATCCTCGTCACTCTCTTCTTCTTCTTCTTCCTCTTCATCATCATTATCATCATCATCATCACTGATATCAA
AAGATGTTTTCTTCCCTTGGTAACGTACACCAGCAATCTTCTTTGGACGGTCTTTGATACCAAGTCCTTGTTTTCCAGCTGTGGCTTTATCCTG
AACCATGTTGTAAAGATTCTCTTGATCGTCCTCACAAAACATTTTTCTCTCCTTAGACTTGGATGATTTCTTTTTGCCGGACTTGGCTCCAAGA
AGACCGCCCGAGACAAACCCGGATTTAAATCCCCACCAGTCTGAAGATGGTTCTTCAATTCTCTGTTCTGTAACACC |
Primers for UN50302 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TTCCTTTTCGTTGGGAGAGA |
59.784 |
20 |
AGGATAAAGCCACAGCTGGA |
59.836 |
20 |
280 |
472 |
751 |
2 |
GAGTCCTTGGCATCATCCTC |
59.617 |
20 |
TCCGGCAAAAAGAAATCATC |
60.016 |
20 |
260 |
574 |
833 |
3 |
TTCCTTTTCGTTGGGAGAGA |
59.784 |
20 |
GGATAAAGCCACAGCTGGAA |
60.214 |
20 |
279 |
472 |
750 |
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