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Simple sequence repeat (SSR)
>UN50342
GGAGCCATGGCTTTGTGCTCGATCTTGTGCCCTCGTATCCCTGTTCGATTCAGACCCAAACCCATTTCTCCTTTCCTCTCAAAACCTTTGTTTC
CCCTCTCTTATAGGGTTTACTCTTCCCTGCAACCTACCCCCTCTACCAAAGATGAACTTGGAAGTGTAAGCATTGGGTTTCTGGGTATGGGAAT
CATGGGTTCTCCAATGGCACAGAACCTCATCAAAGCTGGGTGTGATGTTACTGTGTGGAACCGAACTAAGAGCAAATGTGGTCCTCTCATCGGA
TTAGGAGCAAAATACAAGTCTTCTCCTGAAGAAGTGACTGCAGCTTGCGATCTCACATTTGCAATGCTAGCTGATCCTGAAAGTGCAATCGATG
TTGCCTGTGGGAAAGAATGGAGCCGTATCTGGAATTAGCTCAGGAAAAGGGTATGTTGATGTCTCAACCGTTGATGCTGCTTCATCGGTGTTAA
TCAGCAAGCAAATAAAGGACACCGGAGCACTGTTCTTGGAGGCACCAGTTTCCGGTTCCAAAAAGCCTGCCGAAGATGGTCAGCTGATATTCCT
AACTGCAGGTGACAAACTGCTATACGAGAAAGCTGCTCCTTTCTTAGACATCATGGGAAAGTCAAGATTCTATTTGGGTGATGTTGGTAATGGA
GCAGCAATGAAACTTGTCGTCAACATGATCATGGGAAGTATGATGGCATCATTCGCCGAGGGAATACTCCTAAGCCAGAAAGTAGGACTTGATC
CAAATGTACTGGTCGAAGTAGTCTCACAGGGAGCCATAAATGCGCCAATGTACTCACTTAAGGGTCCTTCAATGATCAAGTCAGTGTATCCTAC
AGCTTTCCCATTGAAGCACCATCAGAAGGATATGAGACTAGCACTGGGACTAGCTGAGTCAGTTTCTCAGTCTACTCCAATTGCGGCTGCAGCA
AACGAGCTTTACAAAGTTGCCAAGTCATATGGTTTGAGCGATGAAGACTTTTTTGCTGTTATTGAAGCACTGAAAGCTGCAAGATCTCAACAAA
GCTAAAGCTTTTAAAAAGATTCGTTCTTTCTTTTCTCATTTCTATGTGGAAAAGAAAAAAAGAGAGTTTCTTTGTTGTTGTTGTTGTATGTAAA
GATGTCAACTTTACTGTTAAAAGCGTCAAACACAATTCAACCTTTGATCTCCTCTGATGTTTTGACTAAAAAGCGATAAAAGAAATGTTTGACC
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Primers for UN50342 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TGCAGCAAACGAGCTTTACA |
60.719 |
20 |
GGTTGAATTGTGTTTGACGC |
59.028 |
20 |
237 |
934 |
1170 |
| 2 |
TGCAGCAAACGAGCTTTACA |
60.719 |
20 |
GGTTGAATTGTGTTTGACGCT |
60.03 |
21 |
237 |
934 |
1170 |
| 3 |
TGCAGCAAACGAGCTTTACA |
60.719 |
20 |
AGGTTGAATTGTGTTTGACGC |
60.03 |
21 |
238 |
934 |
1171 |
|
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