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Simple sequence repeat (SSR)
>UN50369
TTGGAGTTTGATAGATGATTCTATTCAAACAAATAATACCCGGTTATTTAGTGTACCGGAGTCGAAAATTTACATTCTTTTTTTTCTCTCTCTC
TCTCTAGTTTCTCTCCTCTCTAATGATCTTTAGACAAATGTTGGGCTTGTGAAAAAGCTTCAAGCTTCTCTTTATCAGTGTTGGGAAGAATCTT
TGTTCACTTGTTTTTCTCTTCCGGGGGAGTCACCTGAAGCAGCTCTATGTTTAACTCAAACGTAGCTCCAGGCGGTATCTCGTTCATTCCTCTC
TGACCATAACCAGCTTCAGGTGGAACAATCACCGTTCTCTTGCCACCGACTTTCATTCCTTCAGTTATGTAATACATAGCTGGAGGAGGCTTTG
GTGCAGCCTGTGCAGAGAACAACCCGTTTGGATTGTCTACAAACTCTCGTTTCCTTTCCTTTCCTGGAGTTGATCCGACCTTGAACTCGTATGG
CTGAGCAATACTACGATTCCCAGCCAAAAGCTTGGACTCTCTGGTGGAGATTGCAGTGATGCTTCTGTAACGGCAATCAAAATGCACCTGAGCA
GTTGATCCTATTGTGGCTACTGGACCTTTGCCTTCCTCAATGTCATAGTACTTCAACCCTTCAGGGCTAGTGGAATACTCGTCGAGGGGGATGA
CTTTCCTGCTCCGTCTCTCTCTCGCCTCCGAAGAACTCGGCGGTAGAACGAAGAAGCTAGTCAACGGAAGCGAGCCGAGGAGGATAAGATTCGC
GTCTCTTCTGGAAATAGGAAACGAAGAAAAAGTGACGATTTGGTTTGTCTGACGAGATTGATCCGCTGCGTCAGAGATTCC |
Primers for UN50369 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CCGGTTATTTAGTGTACCGGA |
58.886 |
21 |
AATGAACGAGATACCGCCTG |
60.096 |
20 |
237 |
40 |
276 |
2 |
CCGGTTATTTAGTGTACCGGA |
58.886 |
21 |
AAGCTTTTTCACAAGCCCAA |
59.861 |
20 |
115 |
40 |
154 |
3 |
CCGGTTATTTAGTGTACCGGA |
58.886 |
21 |
GAGCTGCTTCAGGTGACTCC |
60.143 |
20 |
194 |
40 |
233 |
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