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Simple sequence repeat (SSR)
>UN50376
GGTCCTTCTTCTTCATAGACCGTCCCAAAGAGGATAAAGTCTGTTTCTTTCTGCAGTGAATCCTCCTTCAGCAACTGGGTTTTTGAAGTTTTCT
TACGAAACTTGATTTGGGTTTTCGTTTATTTAGGTTGAATTTTGGTGAAAAAGAGCCTATCTTGTGTTCGATGATATTCCCCAGAGAGAGAAAA
GGCGAAGACTTTTGATTCTTTTCTTTGTATTTGGGTTTTGTGGGAATAGAGAGAGAGAGATGGCAGGTGAAGATTGGATAGAACTCAAGTTTAG
ACTCGCAGATGGCACTGACATAGGTCCCACCAAGTACAATCAATCTATGACTGTTTCTTCTCTCAAAGAGAAGATCATCTCTCAATGGCCTAAA
GAGTCAGAAAACATTCCAAAGACTGTAAATGATGTGAAGCTCATCAATTCCGGGAAGATACTAGGCAACAACAGGACACTTGCTGAATCCAGGC
TTCCCGTTGGCGAACTTCCCGGGATGGTCATCACTATGCATGTTGTTTTTCGCCCTCCTACTTTAGACAAAAAGAGCGAAAAACTGCAGAATGA
TCCTCCCATGAAGAATCGATGCGCATGCACCATTTTGTAGCTGCAAGTAAATTGGATCATATAGAGAGATTTTAATCCTTCATGATAAAATAGC
ACTGGGTTGTGATGCTCCATGGAACAGCTGAGAAAGTTCCCTTACTGGCATAGACATGAAAAAAAAACAAAGGATCTTCATTACAGGACTTGTT
TACATTTGTGTGGTTGATAATTTATTTTTCATCTTTTTCTTCATTGTTTATCCAAAATGGCTCAAGAAAATGTACTGCAATTCTTGAAGGATGT
TTGTTTTTAAATATATATACAATACGTGCAGACACACTGTTTGAAGG |
Primers for UN50376 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GCAGTGAATCCTCCTTCAGC |
59.957 |
20 |
CAGTGCCATCTGCGAGTCTA |
60.16 |
20 |
247 |
53 |
299 |
2 |
GCAGTGAATCCTCCTTCAGC |
59.957 |
20 |
GTGGGACCTATGTCAGTGCC |
60.395 |
20 |
260 |
53 |
312 |
3 |
GCAGTGAATCCTCCTTCAGC |
59.957 |
20 |
GGTGGGACCTATGTCAGTGC |
60.395 |
20 |
261 |
53 |
313 |
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