 |
Simple sequence repeat (SSR)
>UN50380
TTTTTTCTATATCATTAGTCAAAATGGTTGGGTTACTTCTCCTATCATGGGAAAAGAGATACAAACGGATATTAAATATCAATACACACACACA
CACACACAAACTTACATATATCTAAAGCCCTTTCTTGCTCTCTCTCTCTCTCTCTCTTAGTCGATTGTCATTGGTTGCGTCATGCAACACCTGA
AACGGGCTTTCCTCACAGTCGTCATTACCTCGGTTTCAGCCCCTTCAAGAAGATTGACAATCTCTGCGAAACAAGGACGGACTTCAGGGTCAGC
ATCCCAGCAACGCGTCATGATCTCCCCAAGCACAGGGAGACAATCCCCTGGGACCGTCGGACGCACTCCCCGGTTCACCACCGCGAATGCAGCT
TGAACTGCAGTCATGTTCTGGAACGGTAACAGACCCGTTATCAACTCCCACAGCACGATCCCAAAGCTATACACGTCTACTTTCTGAGTGTAGG
GTCTATGCTGGATCATCTCTGGCGCCATCCATCTGTAAGTTCCCGTCTCTGGTGTCATCCCTTCGGTCTGCACTTCAATTCTTGCAACGCCAAA
ATCAGCAATCTTGATGGAGCGATCAGCTGATATGAGGAGGTTATCTGACTTCAGATCCCTGTGTATAAAGTTTCGCTCATGGACATAAGCCATA
CCCCTAGCAACATCCAATGCCTGCTTAACAGCCAACTTCAAAGGCACAGCCCTGTTTTGTCTCTTAGTCAAAAACTGTCTGACCGAACCTCCTT
TTGCATATTCAGTCACGATGCACAACACCATCGGTTTAATGCAGGCGCCGATAAACCTAACGATGTTGGGGTGTTTCAAAAACGAGAGCATAGA
AACCTCCTGCTGAAACTGCTGTTCGAGGGCTTGTGCCTTTTCGGGACTGTTCTCTGGCCTCTCGAGTAGCTTGATGGCTACATCCTCTCCTTTG
TAAGTCCCTCTGTACAGCTTACCAAACGCCCCTTGAGCAAAAGCGGGTCCCATGTGAAGCTTCCTAAGATCTATCGTCCACTCTTCATAGTTTG
CGAGTCCCTGGGTTGGGTAGCTACCATTCATCAACGCTTGCGCTAAGGCATCATCGTTAAGCGCATGTGTAACTCTTCCGGGGCGAAACACGCT
TTGTCCAACGGAGAGAGAGTAGGGATGGCGCATAGGTTTCAAACCGGGATGGCCGATGAGAGCATCGCTTGAACCAACGCTACTGTTATCCACA
GACATGGAGACAGAGCCTCCGGCGTTACTTGTTTGCATACTGTCCGTGGACATGTTTGTACCATCTTCACCGAGCTTTTTGTAGAAGTCCTGGG
TGAATGGGTAGTAATTGTGGTCGGTGTTGTGATTGCCAGCAGCGAGCACATCGAACCTTGGTGGTCCCTCAAGCATCCTTTTCAATCTTGTAGT
CTTTCAAATCACTCCAATATTCACCTAGAGCTTAATAGGCTCCAAAACCCCCGTGGATTTTGTGAGCTGGAGGAAGCACGAATCCTGTTCACTA
TGAGAAGGCTGATGATCGAAAGAAATCAAGATCGGAATCTCAAAAGCTTAGTTCCGATCAATCTCAGAGCTAGAAAGAGGTGGAGGAGGAGAGA
GAGATGAGTCAGTCAGTCGTCGTCGT |
Primers for UN50380 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TGGGAAAAGAGATACAAACGG |
59.074 |
21 |
GGCTGAAACCGAGGTAATGA |
60.074 |
20 |
182 |
48 |
229 |
| 2 |
TGGGAAAAGAGATACAAACGG |
59.074 |
21 |
TCTTCTTGAAGGGGCTGAAA |
59.926 |
20 |
194 |
48 |
241 |
| 3 |
TGGGAAAAGAGATACAAACGG |
59.074 |
21 |
GTTTCAGGTGTTGCATGACG |
60.16 |
20 |
144 |
48 |
191 |
|
|
