 |
Simple sequence repeat (SSR)
>UN50397
CTCTGAATTGCTTTCTTTTGCTGTAAATAGTTTAGGATTACATCACACAACTCTCTACGAATCATTACATACTCAACAACTCTCTCTCTCTCTC
TCTCTCTCTCTCTCAAGGAATGTGTTTCTTTTTTTTCTCTAAGCCTTAGGAAAAAGAATTTTCAAGTATTGTGTAGCCATCCACCCTAGGATGG
AGAAGTAAACAACAACCAAACAAGCACGCTTCACTTGCACCAAGAGGTTCACTTTAGAAAGCAGGCTTTTAACTGAACAACAAGCGCGAGGGAA
CCAAGATTTCGCATGTCTCAAGATCCGTACCATGACGACCGTGATAATGGAAGTTGAGAAGCCAGATACAATGCCAGCGATCACATCATATCTC
CAGTACTTCCTTCTTCCATTTACACTTAACCACGATTGTAACAATTTAGAGAATAAGACAGCGTATTGTTTAAAAATGTGGGTGAAAGAAAGAT
CATCTGGTTGGCAACCGAAAAAGCCATCTCGATAAAGCTTAATCTTTGGAATCCCTAGTGTGTACCAACAGTCATAAGTTTCATTCACCTTGTA
TTTATCTCTGGTGAGCAAAGCGGCACCAAAGTTAGGTCTACACTCAGGAGGAAGAGCTTCGTTAGGTGCTTCTGAGAAGGCTAGCCTTGTTTGA
CCCATCAAATGATCTGTATACTCAACCTTGAAGACAGAAGCCCAATAGTAATCGTAGCGACATCGGAATTTATCTCTCTCAAAAGGGTAAAACA
CATGTTGTGCTTTGATGTTCAAAAGTCCAATCCCGCACACTTTGGAAGTCCTCAGATCAACCGAGCTGGAGACAATTTTGCAGCGAGAAGCAAG
AGAGGCAGAGGAAGAAGAAGAAGAAGAAGAAACCCACAATTCACCGAGTAGAATCACTAAGATCCCTAAGAGAAACGACAAGAAGAAGAAGCCG
ATGATGGAGAAAACGATCGCTGTACAGGATCTCAAAGCCAACGAAGAGAAAACCCTCTCCTTCTGCTTCTTCCTCTTCGTCACAGACGACGCCG
TTTCGGTTTCTTCCGAGTCCACCAACTATCTTCTTCTCCGCTGAATTTATACTCCAGACACTAAGAAATCGAAGATCCCATCCCTTTCTGACGG
TGATCGAATAAAACGACGGTCTCACCGGAAAAAAAATCAAAAATCTTTACAGATTCAACGATTAAAATCGGTTTTTAGTTGCCCTTTCTTTGAC
TGTCTGTCTGTCTGTCGTTGCGAATGAAATTTTCATTCC |
Primers for UN50397 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TCTGAATTGCTTTCTTTTGCTG |
59.647 |
22 |
CATCCTAGGGTGGATGGCTA |
59.91 |
20 |
186 |
2 |
187 |
| 2 |
TCTGAATTGCTTTCTTTTGCTG |
59.647 |
22 |
CGTGCTTGTTTGGTTGTTGT |
59.658 |
20 |
215 |
2 |
216 |
| 3 |
TCTGAATTGCTTTCTTTTGCTG |
59.647 |
22 |
TCCTAGGGTGGATGGCTACA |
60.474 |
20 |
184 |
2 |
185 |
|
|
