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Simple sequence repeat (SSR)
>UN50647
GGGTCCTAAAGAGAGAGAGAGAAGCAGATCTTCTCATCACGACCCTTGCAATACGAGAGGAGAGAGAGAGATAGAGATAGAGAGAGAGAGAGAT
AATGTCTGGAATGGTTGATGCGAGCTCGTGGGGCGCGGCGTTGGTAAGGATCTCGCCGTACACTTTCTCCGCAATCGGAATCGCCATCTCGATC
GGCGTCTCAGTCCTCGGTGCCGCCTGGGGAATTTACATAACGGGAAGTAGTTTGATCGGTGCGGCCATTGAAGCTCCTCGTATCACTTCCAAAA
ATCTCATCAGTGTTATCTTTTGTGAAGCTGTTGCTATATATGGCGTTATTGTTGCCATCATCCTTCAAACGAAGTTGGAGAGTGTTCCTTCTTC
AAAGATGTATGACGCTGAGCCTCTTCGAGCTGGATATGCAATCTTCGCATCCGGAATCATTGTTGGATTCGCCAACCTTGTATGCGGGTTATGT
GTAGGAATCATTGGAAGCAGTTGCGCATTATCTGATGCTCAAAACTCCACACTCTTTGTGAAGATTCTTGTGATTGAGATCTTCGGAAGCGCTC
TGGGGTTGTTTGGAGTTATTGTGGGGATCATTATGTCCGCACAAGCAACATGGCCGACCAAATAGATAATAACCGGTCTGAAACTGTTGTGATA
TATATATATATATCATGAAAGAACATGGCTTCTTGCATATCTTCATTGTTATATATATAATATTGTAAGCAAAAACTTAATTATAAAGCTCATA
TAATCGATTCACAGTTTGTTGTATTTGATTTAACAGCAGCATGAAATGAGTATTGTTGAAC |
Primers for UN50647 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GCGCATTATCTGATGCTCAA |
59.944 |
20 |
TGAAGATATGCAAGAAGCCA |
57.033 |
20 |
211 |
493 |
703 |
2 |
GATTGAGATCTTCGGAAGCG |
59.917 |
20 |
TGAAGATATGCAAGAAGCCA |
57.033 |
20 |
162 |
542 |
703 |
3 |
TATGTCCGCACAAGCAACAT |
60.142 |
20 |
TGAAGATATGCAAGAAGCCA |
57.033 |
20 |
108 |
596 |
703 |
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