|
Simple sequence repeat (SSR)
>UN50656
AAAGACGCTTGCTTAGGAGACAACAATTCAATCGCATAGTGGAGAGAGAGAGAAATAAAAGCTCCGAGAGAACGAACGAGAAGGGTAGTTTACA
AACAACAAACGCTTTGAGCTGAGAAGACCAGAACAAGTCCTCTTCTGTGTGACCAGTCGACAAATGTGGAGATGAGTTAGCAAAAAAAAAAGAT
GGTCTTCAAAGGACTATGAAGTGGGGACTCCATAGTTGTTTGAAGACGACGTCTCGTGAGCACCTGATTGAGCATTGTTCTTCCTCCTGTTTCT
TCTCCCGCCATTGTTCTTCCCCTTCTTGAACTCCTGCTGATGTTCCACCCCTAAAGAGAAGGTGTGATGAGCTCTGGGATCAAACGCGAAAGGA
TCATTCGTCCCCATCGAGTTTGTCTCAAACGGTGACTGCTGAACGTTAGTGTCAAAAGCAAAGTTACAAGAGGAAGTGAAAGTTGAAGAAGATG
AAGACGAGGAGAATGCTGAAGCGTCTCCTTGAAACATCTCATTAAACAGATCTTGCAACTGTTCAAAACTGTCTCCTGAGTTATTCTCACTAGG
CTTTGACTGATTCATCATGGTAGCCATCTCGTTCAAAAAATCTCCCATCCCGTTTTGGTCATGATCATCATCATCACTATTGTAAGCTCCAACG
TCGTAGAGGAACCTCTTGTTGGAGTCAGACAAAACAGAATAGGCCTCTTGGATAGCCTGAAACTTCTTCTTTGATTCATCTACAAACTCCGAAT
CCCCCATTGATGAACAACGATCTGGATGCCATCTAAGAGCAAGCTTCTTGTAAGCAGAACGGAGCTCGGTGGTGGTGCATTCCTTCTTCAAACC
CAGAACACCATACAAATCATCGTTCCCTTTCGACGCCATTACCTTACAAGAAGACAAAAAAAAAAATATTCTTTCGATGAATTCAACTACCAAA
AAAACAGAGCCACAGTTCAATATCTATAAGAACTTTGGTACTATAGTGAGTGGATTCAACGGACTCGAGGCAATGGTCTTCTGGATGATTAGGG
ATTGATAGGAGATCGTAGACGATCAAAGAAGAAGTTTGGAGACGAGAGGGGAGAAAATGTTTTTTTTTGTTGGTGTCTCCTCTGTATCTCTCCT
CTGTATCTCTCAAGCATACACGTTTTAGAGAGAATCC |
Primers for UN50656 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CGCTTGCTTAGGAGACAACA |
59.22 |
20 |
GGTCTTCTCAGCTCAAAGCG |
60.277 |
20 |
118 |
6 |
123 |
2 |
CGCTTGCTTAGGAGACAACA |
59.22 |
20 |
TCTCCACATTTGTCGACTGG |
59.676 |
20 |
161 |
6 |
166 |
3 |
ACGCTTGCTTAGGAGACAACA |
60.067 |
21 |
GGTCTTCTCAGCTCAAAGCG |
60.277 |
20 |
119 |
5 |
123 |
|
|