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Simple sequence repeat (SSR)
>UN50731
ATAGTTTTGATCTACTAAAGAGAAAAAAAAAAGTGTACTTTTTCTCTTCAGGGCGTTGCTAAAACTAGTGGGATCAGTGTTTTTTTTATTGGGA
GTAAATGGCAACTTTTCATTCTGTTCAAGATGCAGTGAAGCTCTTTAACTCTGGTTTATCTGGAGGAGAACATCTCAACCAGAGGCAAGAACAG
GAGACTAATCCCTGTCTCTGGAATCAAGAGGTTAACAAGTTGAAGGAGATAATAAAGAATGCTGAGATGGCGAAGATCGAGGCTTTGTTAGAGC
TTGAGGAAGCTAAGAAAACGGTTGAGCATCTCAATCACAAGCTGAGAAACGATGAGAAAGGTTTAGATTTGAGTAGTAGTAGTAGTAGTAATGT
GAGAGATGTGACTTCAGAGCTAGGTGTTGCTAAAGAATTGCTTCAAAGAGTAGTTAAAGAGCAGAGTCATCACGACTTAGATAGTAATGTGATA
GTTGTGACTTCTGAGCTAGGCTTTGCTAAGGAATCACTTCATAGAGTAGCTGAAGAGGAGAGTGAGTTAAGTAAATTAATGAAGTCTCTTAAGC
TGGAGCTTGAAAACGTGAAGAAAGAACATTCTCAGCTTATAGAGAAAGAGAAAGAGCAAAGAGAAAGAGACCAAGCCGTCGAGGAGCTGAAGAA
GGAAGCTGAAGATGCAAAGAGGGAGCTCTTGATGTTAGAGGAAGAGCTCAAGGAAGCAGAAGAAGCCAAAGCAAAAGCTGTAGAGGAGGAATGT
GTAAACGTTCACGAAAGTGGTGGTGGTGGATTAACAGAGACGGAAGTGTTGAGAGCATGCAGAGACGAAACACTGAAGAAACTAGAGATGAGCG
AGAAGGAGATTGAAGATATAAAAGCAGCAACGCAGGAGGCGTTGAAGAAAGCAGAGATGGCTGAGGAAGCAACAATTGTGGTGGACGCAGAGCT
TAGGAGAAGGCGTAAAGCAGCGAGTAGAATCATGGCAGAATCCAAAATCTGTGCTAATAAGTCGTTTCCCTCTGCAAAGGAAGTGCACAAGTCG
AAAACGAGATCCAAAGAGACATGTTTGGTCAAGTGTTAGGGAAAAGGACCTGTGGTCTCTTTTGAAATTTGTGACATTCTGAAGAAATAAGTGT
CACTTTTGTTCAAAGTTGGAAGCTTTTAATAATGTTGATGGGGTTGTAGTTTTGTTGTATTGTGTAAACATTCAGTATCATCATCTTATAAACT
AACCAAATAATTTTACT |
Primers for UN50731 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
AATGCTGAGATGGCGAAGAT |
59.803 |
20 |
GCAAAGCCTAGCTCAGAAGTC |
58.5 |
21 |
251 |
246 |
496 |
2 |
AATGCTGAGATGGCGAAGAT |
59.803 |
20 |
GAAGTGATTCCTTAGCAAAGCC |
59.398 |
22 |
265 |
246 |
510 |
3 |
GCTGAGAAACGATGAGAAAGG |
59.066 |
21 |
CTTCACGTTTTCAAGCTCCA |
59.047 |
20 |
262 |
323 |
584 |
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