 |
Simple sequence repeat (SSR)
>UN50811
GGGAAATCAGATTCCTTTACCCGAAAAATAACCATCAACCTTTTTCTTATTTATCTCTCTCTCTCTTAGCTTCCTCGGTTTCATCGTCAACTGC
ATTTCATCTGTCTCAACAATGGCGTCATTTTCTGTATCTTACGCCAAGATCTGTGCTCCGAACCAGCGGTTCGGATCTTTTCCTGGAACCCGAC
GGCAGCCGCAACTCAATGGCGTATCCTTTCCCTCCGATGTATCTCAGAATCAATCTACAATCTGGAAGTTGCGTGCGACAACCAATGAGGTTGT
CTCTAACTCAACCCCAATGACAAACGGTAACGGGAAAGTGAAGAGCAATGTTCCTGAACCTGCCGAACTCTCTGACTTTATGGCCAAAGTCTCT
GGTCTTCTTAAGCTTGTGGATTCAAGAGATATAGTGGAACTTGAACTGAAGCAACTCGACTGTGAGATTGTTATTCGCAAGAAGGAAGCTTTAC
AGCAGCAGCAACCTGCACCAACAGCAGCTCCAGTTTACCACTCCATGCCTCCTCCAGTGACAGGATATCCAATGCCTCCTTCTCAACCAGCTGC
TCCTCCTGCTTCTCCTACTCCCTCCTCAGCCCCTGAAACAGCAAAACCAGCAACCCCACCTGCCTCTTCTCATCCTCCACTTAAGAGTCCTATG
GCTGGTACTTTCTACAGGTCTCCTGGACCCGGTGAACCCCCTTTTGTCAAGGTTGGTGATAAGGTGCAGAAGGGTCAAGTTGTTTGTATTATCG
AAGCTATGAAACTAATGAATGAGATTGAGGCTGAGAAATCAGGAACCATCACTGAACTACTAGCTGAAGATGGAAAACCGGTTAGCGTTGACAC
GCCTCTGTTTACCATCGTGCCTTGAAGCGTCATTTTAGCTGGTTCAGAACATCTTCCGAGTTTTAAGTGCTTATCCCGGTTTGATTGTTTTTTG
TTTTTTGTTTTTCCTAAACGGTCATTTTTTGTGAGAATCACATAACGTATTAATATGCATGTCTTTTAGAATAATTTCGACAAAACTATTCAGT
TTATAATGTGTTGCACTATCTCCCCTTGTTTTAGTAATTTAATAAATTAACATTGTTTT |
Primers for UN50811 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CCCGAAAAATAACCATCAACC |
60.406 |
21 |
AGGATACGCCATTGAGTTGC |
60.103 |
20 |
196 |
20 |
215 |
| 2 |
CCCGAAAAATAACCATCAACC |
60.406 |
21 |
ATGACGCCATTGTTGAGACA |
60.12 |
20 |
103 |
20 |
122 |
| 3 |
CCCGAAAAATAACCATCAACC |
60.406 |
21 |
GACGCCATTGTTGAGACAGA |
59.837 |
20 |
101 |
20 |
120 |
|
|
