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Simple sequence repeat (SSR)
>UN50864
GCAATCAAAACAATCTTTGCCAAGTGATAAACCTTCCACCAAGTATACATTTCAACTGCAACTCTCCCACTCTCTATTCAATAGGTTTCCAAAC
TCTAGAAACTTGTCCAAATATCTTATCTTTAGTTCTCATTGAAGTGAATGCCACCAAGTTTCCAGACAACATAAGTGGTAGCAAACATCACAGT
GCTTATGAACACAAACGAAAAGGCAATCACCAGTATATCTGCACTTCCAGGTAGATCAAAGGTAAGCCCTTTCTTCGGCATACCTCTCTTGCTA
TCATCAAGCATGTTGGTCGGTGCTTCGGGTAGACCCGGTTTCCTATTAGATTTCTTGTCACTCTCCTTGAGCACCTCCAGGATCTGGCTCCCCA
TTTTGGGTTTCGATGGTTTCGGCGTCGTTCCGTGTATCGACTAAGGACACGAGCTGCTCTTAGCCTCTCTCTTGCTGTCAACGGCGCTCTTTTC
GCGGAACCGTTGTTGTTGTTGTTGTTGCTTGGTTCAACGGGTTTGCTTGAGGAATCCGAAGAGGGAGGAGGGTCGTTGACCGATGTTGTTGCGA
TGGAATCTTCGTTTGACTTCAGACAAGATGAAACCAATCTACGTTTGCTTGAAAGTAACGGACTGGGAGATGTGTTGAACGCTAAAGGTGAAGG
CTTTAACGTTGTGACTTGAGTTGAGAATCTTACAACGGGGTGGGATCTGTTATGAAGCGGAGAACTGAAGCCGGCGTTGACAGCAACGGCCATT
TTGAATAGAGATGAACGTGTCTTTAAGAGCTATGCATATCC |
Primers for UN50864 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CACTCTCCTTGAGCACCTCC |
59.986 |
20 |
CAACAACATCGGTCAACGAC |
60.008 |
20 |
221 |
341 |
561 |
2 |
ACTCTCCTTGAGCACCTCCA |
59.986 |
20 |
CAACAACATCGGTCAACGAC |
60.008 |
20 |
220 |
342 |
561 |
3 |
CACTCTCCTTGAGCACCTCC |
59.986 |
20 |
AACGAAGATTCCATCGCAAC |
60.081 |
20 |
237 |
341 |
577 |
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