 |
Simple sequence repeat (SSR)
>UN50865
AAGCTAAAAATCAATTCTTCTTAAGATCATCATCATTCCCAAAAAAAATAATACAAGAAAAAAAGGATCTAGACTTCTGTATCTAGAGAGTTTC
ACTTCCAAAAAAAAATATAATAAAGGTCTTCTTCAGGGCTCTTTCTTCCTCCCAATCTTTCTCACTGTTCCTTCGGCTTCTCGATCTTGACATA
AGGAAGAACTCCCAGAAAGTACTTCACCTTCGGATTCCATCCACGTTGCTGAGCTCGACAGAACATCAAGAACGTGTTCGCGCAGTAAGAGTTG
AAACTCATAAACACATGCCAGAGAGCATGTCCCTGAGGATTCACAGACCACTGAGATATCGTCTTGCAGAACACACGGTCACAGAACCAGCACA
CGCTTCCCACTAGGATCGTAGCGACGTACCACTTGGCAATCCTCTTGGCCGCGGTGTCCTCGGTGTGGATGTAGTACTTGTACATCCGAGGGAT
GCAGAGAAGGCAGAGGACCACGTAGTGGACTTTAAAACCGATGCCGAACGTGAGGTAAGCGTGGACTGCGGCGAAGGCAGCACCGTAGAGGAAG
AGAAAAGTGGGCATGGTGCTTCTGTAATGCCAGTCCGGTGAGTAGAGGATGTACATGTAGAGAAGTATCTCCCACACCATTGGGGTCTCATCAC
TCTGTTGTTGCACGTGCTGCAAAGTGGCATGGTAGAGCATGCTGCCGATAGCAAGGATCATGTTGGAGATGTGAAGGATGCTAAACCTCTTCTC
AAAGCGTTGCCTAATGGCATTGACAAGACCAATGAGAGCGAGTAGGATTCCGGGGACACCGGAGATGGTGTTGTAGAACTCAGCGATGTAAGAG
GAGTAGGCGTAGTTCTTCTCACAACACTCAATAGTAGAGGTCACAGGACCCCAAAAGCTCGACATCCCATCAGCCATTTTCTATCCTCCTCTCA
GTATGAATCTTACTCCTCCCTTTAGACACTACTACGTTCTTTCTTTTACTTTCTCCTGGCGATGTTGATGATGATGATGCAGACAAAGAAGATC
TATCTTCTTCCTTCCTTCCTTCCTTCCTTCACCCAGAGAAATCTCTTAGCAGATCGAAGGAATCAGATGGATAGATGACTTATCTCTCTCTCTC
TTTCTCTCCCGATCGTTTCTCTTCTTCTTCGGCTTCCC |
Primers for UN50865 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CATCCCATCAGCCATTTTCT |
59.894 |
20 |
GGGAAGCCGAAGAAGAAGAG |
60.455 |
20 |
258 |
909 |
1166 |
| 2 |
AAAGCTCGACATCCCATCAG |
60.218 |
20 |
GGGAAGCCGAAGAAGAAGAG |
60.455 |
20 |
267 |
900 |
1166 |
| 3 |
GTAGAGGTCACAGGACCCCA |
59.962 |
20 |
GAAGAGAAACGATCGGGAGA |
59.361 |
20 |
273 |
880 |
1152 |
|
|
