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Simple sequence repeat (SSR)
>UN50871
GGAAAACCTCACTCGCCGATCTATCTCAACAGGGTCGGAACGAGATAGAGAGAAAGACAATGGCGGCGACGCTTATGAACAGAGCAATCTCCAG
AACCGAAACAACCGGTGCTTTCAGACTCTCGCTCAACCTCCTGAGAAACTTCTCAGCTGCTCCGGCGGCGGCGGCGGCATCTCCGTCATCTGAA
AACCCTAGCTCCGATCCGATTAAACCTAAACGAAGGAAGAAGAAGAACCTAATCGAGGTCGCTCAGTTTTTACATAACTGGGGAATCGGATACC
ATATGGCTAAAGCTCACTGGAACGGAGTCTCTTATGAGATCACTAAGATCAATCTCTACAAGGATGGTAGGCATGGCAAAGCGTGGGGTATTGT
TCACAAAGATGGGCTGCGAGCTGCGGAAGCTCCTAAGAAGATAAGCGGAGTTCACAAACGCTGCTGGAAGTATATCCCTAACCTGTCCAAGACC
ACACTTGCAACAACGAACTCTACACCCGCCGCTGAAGTTCAAACTGATTGATCTGTTTGCTTCCATTGTTTGTTTGGGTACTTCTTCTCAGGAT
ATATCTGTTTGCAGTTTGTTTACCTTTTGGAAGATACAACTCTTTGTTACTTGATGAGTCACTTTTGAATTCCGTGGTAGCTTTGTAGGAAAAG
AACACATAAAGAGTTTGGATGATGATTGGCTTTTCGATCCATCTTTTAAAGACTTAATACGCTTCTTGACATGGATTGTGATTGGCTTTTTGTG
TGAACTTGTGTTGTAGGAGATCTTCTGGTTTTAAACATCTAATAAAATACATCATTTACG |
Primers for UN50871 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CGCTCAACCTCCTGAGAAAC |
59.989 |
20 |
GAGACTCCGTTCCAGTGAGC |
59.993 |
20 |
190 |
124 |
313 |
2 |
AGAGCAATCTCCAGAACCGA |
59.95 |
20 |
GAGACTCCGTTCCAGTGAGC |
59.993 |
20 |
233 |
81 |
313 |
3 |
AGAGCAATCTCCAGAACCGA |
59.95 |
20 |
CGTTCCAGTGAGCTTTAGCC |
60.015 |
20 |
226 |
81 |
306 |
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