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Simple sequence repeat (SSR)
>UN50920
ACGCAGTATTCCCTTTTACTCCTCCCCTAATTTCAAACCCTAGCTCTTCCTCCTCCTCCTCATCAAGAATCGAGAGACCATGAAAGGAGGTAAT
TCAAAGGCCGACTCCAGAAACTCAAAGCTGTCTGTGAACAAGAAGCCTACGAAGGCGAGCAAAGGAGCTGCTGCTGGTAAAGATCCTAACAAAC
CTAAGAGGCCTGCCAGTGCTTTCTTCGTTTTCATGGAGGACTTCCGTCAGACTTACAAGAAGGATCATCCCAACAACAAATCTGTTGCTGCTGT
TGGAAAAGCTGGTGGAGAGAAGTGGAAATCCTTATCAGACGCTGAGAAGGCTCCCTACGTAGCTAAGGCTGATAAGCGCAAGGTTGAGTATGAG
AAGACCATGAAGGCCTACAACAAGAAGCTGGAGGAAGGTCCAAAGGAGGACGAGGAATCTGATGATAAGTCAGTCTCTGACGTTAGTGAAGAGG
AGGATGCTGATGATAAGAGTGATGAGGAGGAAGACGATTGACTAACAAGTTGAAGTTGGCAGCATTATATAAAGGACAGCTGCAACGATCCCTC
TCTCTCTCATGTTTTTCTTTCTCTTAAAATGTTAACGAGGCTGCTTTTATTTTCTCTCATGTTTCTGTTTAGTAAGCTATCACTATCTCCCACT
GATTCTGATTCTGATTCTGATTCTGATTCTGATTCTACGGGTAATGGAAAAAAAATTGTGCTATCTTCATGCTTGCAGCTAAGTTTTTATGGCT
CTATGTTTGTTAATTGTTATGATCAT |
Primers for UN50920 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CTGCAACGATCCCTCTCTCT |
59.555 |
20 |
GCTGCAAGCATGAAGATAGC |
58.778 |
20 |
188 |
550 |
737 |
2 |
CTGCAACGATCCCTCTCTCT |
59.555 |
20 |
AGCTGCAAGCATGAAGATAGC |
59.772 |
21 |
189 |
550 |
738 |
3 |
TGCAACGATCCCTCTCTCTC |
60.497 |
20 |
GCTGCAAGCATGAAGATAGC |
58.778 |
20 |
187 |
551 |
737 |
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