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Simple sequence repeat (SSR)
>UN50991
GGATCTCATTTTGCCTCAAATCCATCAGTGAAGGGCAGCAGGAGGAGGAGGAGGAGCAACCAGTAGCCATGGCGGAACAGACTGAGAAGGCATT
TCTAAAGCAACCAAAGGTGTTCCTAAGCTCGAAGAAATCAGGGAAAGGAAAGAGGCCTGGAAAGGGTGGAAACCGTTTCTGGAAGAACATTGGT
TTGGGTTTCAAGACTTCCCGCGAGGCCATTGACGGACATTACATTGACAAGAAATGTCCACTCACTGGAACTGTCTCTGTGAGAGGACGTATCT
TAGCTGGTACTTGCCACAGTGCCAAGATGCAGAGAACCATCATTGTTCGCAGAAACTATCTCCACTTCGTCAAGAAGTATCAAAGATATGAGAA
GAGACATTCCAACATCCCTGCCCATGTCTCACCCTGCTTCCGTGTCAAAGAAGGTGATCATGTCATCATCGGCCAATGCAGGCCGTTGTCAAAG
ACCGTGAGGTTCAATGTGTTGAAGGTGATCCCAGCCGGCGCATCTGCCTTTGCAAAGAAGGCGTTCACTGGAATGTAATAGTTTTGAAGTTACG
GAGAGTCTTCTTCGTTTGGTTTTTATATTTCTTTCGGAATTTTCTGTTTGTTGATCTCTTTTGTGTAAGACTTGGTCTATCCACAGACTGAATA
GAAACCTACGTACTACTTTCGTCATCTGAAATTACTACATTCGACTGTGCTGTGACTTCTGTCTTTGGTATCTCCAGAAGAAATCAAGT |
Primers for UN50991 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TTGCCTCAAATCCATCAGTG |
59.648 |
20 |
CTTTCCAGGCCTCTTTCCTT |
59.821 |
20 |
148 |
11 |
158 |
| 2 |
TTGCCTCAAATCCATCAGTG |
59.648 |
20 |
TTTCCAGGCCTCTTTCCTTT |
60.18 |
20 |
147 |
11 |
157 |
| 3 |
TTGCCTCAAATCCATCAGTG |
59.648 |
20 |
GTAATGTCCGTCAATGGCCT |
59.82 |
20 |
220 |
11 |
230 |
|
|
