 |
Simple sequence repeat (SSR)
>UN00501
AGGGGCTGACTTAAATCTCCAAACTTCGAGAAAATCTCCAAATTTCCGAGTTAGTTTTTTATCGTTTAAATTCGTCACAGTTCTTCAAATTCCA
AGAAACCCACAAGAAAAAAATATCAGTATCACTTCTCTTTGGTGAGAGAGATCACACCAAGCAACCAAAAAACAAGAGAGATCTGAAAATCTTT
ACATCATCCATCAATGGCATCATCAGGCCTGACTCGTTCGGGAAGTGCGCCGCAGTTCCATCTAGACGAGAAGTGGAAGCTGGCCAAGAAAGAC
AGTTTAAGCGGAAGGATCACTCGCTCCTCCTCGACGTCTTCTATCCCCATGAACGGCGGCAAGAAGACACACAAACAGGGGAGATGCGCTTTTA
CGAGGAAGTGCGCGAGATTAGTCAAAGAACAGAGAGCTCGTTTCTACATCATGCGTCGATGCGTGATCATGCTTGTCTGCTGGAGAGATAATTA
CTCAGATTCTTGAAAAAAACAAACACCAATCTCTCTCCATCTCTCTGTGTTTCTTCATCTCTCTGTTGTGAAACAGAAGTAGATAGATCATATA
CGCAGGTGTATATATGCTCTTTTGTTTTCTGTTTCTTTAGATTAAAAATTAGATTTGTAACTTTTTATGTATGAGTTCTTGCAAGAGAGGAGGA
TGTATGAAAGCCTTTTTCAAAAGAAAAATAGAGAGGAGGATGTGCTCAAGATCAGGTTTTAACAATGTGATCAGTATAAAATATTGAATTAGAT
TCTTATTGTGACGATTAATTTGGTCTTTCTTTGAATCTTCTTCATGTTCTTTAATGATCTTTACTGTGATGATGTTGACGATGAATGTGGCGTT
TCTCTCTCTCTCTCTAGAGTCTAGAGGTTGAAAGAGAGAGAAAAAGATTCCATTGGAACTGTTACAATTAAGCTACGTGTGGATCATGTGTGGA
TCATGTGTTAATCAGTTATGACAAAGTGATTAGTTTTCTTTTC |
Primers for UN00501 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
ATGTTGACGATGAATGTGGC |
59.379 |
20 |
ATCCACACATGATCCACACG |
60.255 |
20 |
118 |
824 |
941 |
| 2 |
GGAGGATGTGCTCAAGATCAG |
59.818 |
21 |
ATCCACACATGATCCACACG |
60.255 |
20 |
249 |
693 |
941 |
| 3 |
GAGGATGTGCTCAAGATCAGG |
59.818 |
21 |
ATCCACACATGATCCACACG |
60.255 |
20 |
248 |
694 |
941 |
|
|
