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Simple sequence repeat (SSR)
>UN51125
TCCACTAAGGAAAAGGAGGAGGAAGCAATGGATTGTATCGTCTCCAGCTCGACGGTTCTTATCCGATCACATCTCGCTCCAATTCGCTCAGCTT
CCATCAAACCTCTGAGCTCAGCACAGGTCGCATCCTCCGCGTCTAACCGCCACATACTCTCGTTCAATTCCAGTGGTAAAAGAACCAGAACACT
CTCCACTAACGCTTCTACGATAAGATGCGGAGGAGGAATCAAGGAGATCGGAGAGAGTGAGTTCACCAGCACGGTTCTCGAATCGGACCGGCCG
GTTCTGGTTAATTTCGTTGCCACGTGGTGCGGTCCCTGCAAGCTGGTCTATCCAGCTACGGAGGCTTTATCTCAGGAGTATGATGACAGGTTGA
CTATTGTGAAGATTGATCACGACGCGAATCCTAATTTGATAGCAGAGTACAAGGTTTATGGTTTACCGCATTTTATACTGTTCAAGGATGGTAA
GGAAGTGCCAGGTAGCAGAAGGGAAGGTGCTATTACAAAAGCTAAGCTTAAGGAGTACATTGATGGTCTCTTGTCCTCTATTTCTGTTACTTAA
TCCGGTTAATTTTTCTCTTTCTCTCTCTCTCTCTCCACTGGTATTTTTCTCATTCCTCAACCACACTGTTTGTTATGTAAAACACATTCTCTTG
AGTAAATGTGTAAATCTAGCAACAGATTGTTACTAAAAAAAAA |
Primers for UN51125 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
AGGAAGTGCCAGGTAGCAGA |
60.012 |
20 |
CAGTGTGGTTGAGGAATGAGAA |
60.149 |
22 |
163 |
470 |
632 |
2 |
CACGACGCGAATCCTAATTT |
60.096 |
20 |
CAGTGTGGTTGAGGAATGAGAA |
60.149 |
22 |
239 |
394 |
632 |
3 |
AGGAAGTGCCAGGTAGCAGA |
60.012 |
20 |
CAGTGTGGTTGAGGAATGAGA |
58.71 |
21 |
163 |
470 |
632 |
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