Simple sequence repeat (SSR)
>UN51726
CCACCAATCTTAAAAAAAAACCTCAAGAAATAGTTCATAAAGGATCTTCAAAGTGATGAAAAACATTTTCTTAGCCGGAGAGGCACCACCAGAA
AAAAAATGCAGAAGAAGCCCTTCAAGGAAGAGACAGGGGAACCTCAATAGTTTGTTTAGCTTGGCCATGAGAAAGCAAGGAGACAACAACAACA
AAAAGTTATGGGTCTTATAACTTTATGGTAATGGCAAAAACCGGCAAGTCATATATCGGCATCAGGCTCGTGTGTTTCGAGTTGTATTTGGTTG
TAATATAGATCTTTTGAGTTGTTTAAGATTTAACCTCTACCGTATGAAATCATCTTTGATACTTCTGTACCAGTAAGAAAGAATATTGTAATAT
TGATTGTCTTGTGTGTGTGTGTGTGTGTTTCTTTCCTGTTTTTTTTCTGGAATAAAAAGTGGACAATGTTTGGCTGC |
Primers for UN51726 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
ATATATCGGCATCAGGCTCG |
60.045 |
20 |
CAGCCAAACATTGTCCACTTT |
60.023 |
21 |
214 |
239 |
452 |
| 2 |
AGGCTCGTGTGTTTCGAGTT |
59.914 |
20 |
CAGCCAAACATTGTCCACTTT |
60.023 |
21 |
201 |
252 |
452 |
| 3 |
ATATATCGGCATCAGGCTCG |
60.045 |
20 |
GCAGCCAAACATTGTCCACT |
61.107 |
20 |
215 |
239 |
453 |
|
|
