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Simple sequence repeat (SSR)
>UN51840
GGGAGTGAGAGAGTTGGTTCGTTGATCGAGAAAATGGAGATGGAGAGAAAGACGAAGGAGATGGAGAAGTTGTGCCGGAGGTGCAAGGGAAGCT
ACAGAGATTCCTCGAACAACGCTTCCTCTTGCCGTTTCCATCCTTCCTTCTTCGTTTGTCGTCGCCACGACGACCAGAAAAGGTTATGCCCCCC
CCCCTGAATCCCTAATTCCGTACAGCTTGAAAGAATCAGGTTAATCTGATTCCTTGTGTGTTTATTATTATAAGTAAGATAAATATGAGCAACG
TTGTCTTCTGTGCCCTCTCGGCTTGTGATTCTCTTTTTAGTTCTCTCATTGCAAGCATTTAATATTCTTTTAGTTGGATTATTTAGCTACAGTA
TGTGGCATCACTTGTCCTCTGACTTATTAAGAGTATTGACAAATGAAGGTACTATGAATTGGGACCAGAAGATCCACCATATGCAGCCAAGTTC
TACGATTGTTGCGGGGCAGAGGATCCTAATGCACCTGGTTGTCTCACCAGCCTTCACATTTCATATGACGACTGATTTTGTCACTCAACTCTCT
CTCTCTCTCTCTCACAAGCCTCTGTTTTCCTTTTCTATAAACACCATGTAAATAATCCCACGTACTATATAGTTGTTCATCTCGTGGAATGAAA
TAATCGGCTTGTG |
Primers for UN51840 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
AAGATCCACCATATGCAGCC |
59.923 |
20 |
GCCGATTATTTCATTCCACG |
60.289 |
20 |
222 |
445 |
666 |
2 |
AGTTCTACGATTGTTGCGGG |
60.132 |
20 |
GCCGATTATTTCATTCCACG |
60.289 |
20 |
201 |
466 |
666 |
3 |
TCACCAGCCTTCACATTTCA |
60.24 |
20 |
GCCGATTATTTCATTCCACG |
60.289 |
20 |
153 |
514 |
666 |
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