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Simple sequence repeat (SSR)
>UN51846
GGAAAGGAGAAAGATTTGGAAATTAAGGAAGAAACTGGAGAGTAGCTAGTAATGCCTTCTCATTCTGGAGATGACAATGTTCTTCAAGTTCTCA
TCAAGAACTTCGATGTTCTTGCTCTCCCATTGGTCGCTCTCGTCTACCCTCTGTATGCATCAGTGAAAGCAATAGAGACAAAATCATTAGCAGA
AGACGAGCAATGGCTCACATACTGGGTTCTCTACGCAATCATCTCCCTCTTCGAACTCATTTTCTCCAAACTTCTCGAATTGTTTCCGATATGG
CCGTTCTTGAAGCCGGTGGGGATATGCTGGCTAGTGCTGCCACAGTTTAACGGAGCAGAACATGTCTACAGACATTTTATCAGGCCATTCTACA
TGAACCCTCAAAGAGCTTCCACCAATATTTGGTACGTTCCTCAGAAGTACATGGAGAAACGCGGCACCGACGCATTTGAACGAATGATCGTCAG
GAAGGATAGTTATGAAAGAGGGAGGAGAGGAGGAGGAGGAGGAGGAGGAAGCAATAACTACATGATCTTTGATGATGATTATAGGTACTAAGTT
TACCATGTTTCCTGTGGTTTTGATCGGTCACTGATCTGCTCTTAAACCTGTTTGGCTACATTATTCAGTTTGTAAGCTGGGCTGTGTGACTTTT
GTTTATCTCTATGACTTAAATAATTG |
Primers for UN51846 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
ACGAATGATCGTCAGGAAGG |
60.073 |
20 |
AAAGTCACACAGCCCAGCTT |
59.914 |
20 |
202 |
456 |
657 |
2 |
ACGAATGATCGTCAGGAAGG |
60.073 |
20 |
TCAGTGACCGATCAAAACCA |
60.088 |
20 |
143 |
456 |
598 |
3 |
ACGAATGATCGTCAGGAAGG |
60.073 |
20 |
GTCACACAGCCCAGCTTACA |
59.905 |
20 |
199 |
456 |
654 |
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