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Simple sequence repeat (SSR)
>UN51939
GGAATTTTGTCTTGAGTTCTGTTTCTTCTTGTAGCTTCGAAGCTAGAGAGAGAGATCAAGTGAGTGAGAGTGGTGTGGAAGCAAAATACACGAT
CTGCCCCTTTCTTTTTATTCTTCGATCGGAGCTTTCAGACATTCCGACAAAAGCAAATAAAAGGCTTCTTCTTTTGTTTCCGGGAGAGATTTGT
CTCCCTCTGTTTAGAAAATGGAGCGGTACGGTCGCGCCGGCGAAGAAGGGTCGCGATCGGATCCGTCGATTCAATGGACCTCTCATGGAGTTGA
AGCTTCGATGGCGCGTTTAGTGTTGAGCGGTGGCGTTGGAGCTGGAGGAGGAGGAGAATCGTATCCGGTGCGATCCGATGAGCCTGATTGTATT
TATTACTTGCGAACCGGTGTCTGCGGGTACGGGTCAAGATGTCGGTTTAATCACCCACGAGATCGTGGAGCTGGTATTGGAGGTTCGAGAGGAG
GAGGAGATGGAGCTTTACCGGAGAGAATGGGACATCCGGTTTGCCAGCATTTTATGAGAACGGGGACATGTCAGTTCGGTGCTTCTTGCAAGTA
CCATCATCCTAGACAAGGAGGTGGTTCTATTGCGCCTGTCTCTTTAAGTTATTTGGGATATCCATTACGCCCGGGAGAGAAAGAGTGCTCTCAT
TACATGAGAACCGGTCAGTGTAAATTTGGTTTGACCTGTAGATTCAACCATCCAGTTCCATTGGGGGTACATGGACAACAATCTCAGCAGCAGC
AGCAGCCACAGCCGCAGATGCATTCTGTATATCCAACACTTCAATCTCAATCCATGCCTTCATCTCTCAACAGTATGGTTTAGTTTTGT |
Primers for UN51939 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GGTTCTATTGCGCCTGTCTC |
59.843 |
20 |
TTGAGAGATGAAGGCATGGA |
59.322 |
20 |
236 |
587 |
822 |
2 |
TGTCAGTTCGGTGCTTCTTG |
60.025 |
20 |
GAAGGCATGGATTGAGATTGA |
60.029 |
21 |
275 |
539 |
813 |
3 |
TTTGGGATATCCATTACGCC |
59.621 |
20 |
TTGAGAGATGAAGGCATGGA |
59.322 |
20 |
207 |
616 |
822 |
|
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