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Simple sequence repeat (SSR)
>UN51998
GGTTCTCTCAACATTCGCCGTCTTCCTTCCTCTAATCTCTCTCTCTCCATCGATTTCTTCTCCGCGATTACAAATTTCGAGCCGTTGGTTGAGA
CCTGAGGTGTATCCCTTGTTCGCCGCTACAGGAGCTGCGGTTGGGATCTGTGCGTTCTCGTTGATTAGGAACATCACCGGAAACCCTGAAGTCA
GGTTTGTATCTCTCTGTCTTTACGTCCTATTAACAGTTGTTGACTTATCTCTCGTAGTTTGTAGATATTGCTATTTTGCAAAACGATGTCGTTT
AGTCCAGATACTCGGTAAATGAAACAGAATAGTGTCTTCATAGGATGCAGTTCTGTATTAGATTATACTTAATGTGGTGAAATAAAACAGCGAC
TTTCAGTATAGCGAGCTATATATTTAGACCAGTTTTTTGAGGTTTTGGTTCTTTGACATATCTTGCAGTATTAGAATAGAGGTTGTGTTCTAAA
AGGTTTTTTCTTTTTTTGGTTTATTTCTGCAGATGTACCAAGGAGAACAGGGCTGCCGGAATATTGGATAACCATGCAGAGGGAGAGAAGTACA
AGGAGAATTTCTTGAGGAAGTATGTTCGCGACAAGCGTCCAGAAATCATGCCTGGCCTCAACAAGTTCTTCACCGATCCTACTTACTGAACCTA
CCATTTTTCTCAAGACTTTCTTGTATTGTTTTCTGGAATATTGGGATTTTGATTGAATCTCTCTCAGTGTCTCTTAATAAAAATATCATTTGTC
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Primers for UN51998 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GTTCTCTCAACATTCGCCGT |
60.263 |
20 |
ACCTCAGGTCTCAACCAACG |
60.151 |
20 |
101 |
2 |
102 |
| 2 |
GTTCTCTCAACATTCGCCGT |
60.263 |
20 |
GGTTTCCGGTGATGTTCCTA |
59.79 |
20 |
178 |
2 |
179 |
| 3 |
CTCTCAACATTCGCCGTCTT |
60.397 |
20 |
GGTTTCCGGTGATGTTCCTA |
59.79 |
20 |
175 |
5 |
179 |
|
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