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Simple sequence repeat (SSR)
>UN52030
CGACGTTTTAGTGATCATCTAGAGAACTGTATAATGATTTCGTTATCGCAAAAGCATTAGATCGAACAAAGTTTGTAGGCGAACTCCATAGCTA
CGTTTCTCTATTGACTCATTCACAATAGATTCATTTGTTTATGTGACTTCAATCAAAAAAAAAAAATTTGAATAGCGGAAGAAGCGAAGATGGT
GGAATCGTTTCATATGTTTCAGACCTTCAACACAAAGAAGAAAACGAATAGGGAAAGCTGCTCTTGCTCCTGAACCGGTTCCTACCGATTCCAC
ATCCAATTCCGGTTATCGTTCGGTTATGACGGCTCTTCCTTTCATAGCCCCACCTTCCTCTCCAGCTTCCTTCTTCCAATCAGAACCTCCTTCC
GCTACACAGTCACCTGTAGGGATCCTCTCCTTTAGTCCTCTACCTTCTAACAGCCACAACAACAACAACAACAGCGAAGAACGTCCTTCGATCT
TCGCCATCGGACCTTACGCTCACGAACCTCAGCTGGTTTCTCCTCCGGTTTTCTCTACTTACACCACCGAACCGTCTTCGGCTCCGGTCACGCC
GCCTCTCGACGAGTCTTTCTACTTAACCACCACCACACCTTCTTCGCCTGAAGTCCCTTTCGCTCAGCTCTTTAACTCCAGCAGTAAC |
Primers for UN52030 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CCTTCCTCTCCAGCTTCCTT |
59.95 |
20 |
AGACGGTTCGGTGGTGTAAG |
60.028 |
20 |
213 |
335 |
547 |
| 2 |
TTCCGCTACACAGTCACCTG |
59.897 |
20 |
AGACGGTTCGGTGGTGTAAG |
60.028 |
20 |
175 |
373 |
547 |
| 3 |
CCTTCCTCTCCAGCTTCCTT |
59.95 |
20 |
GACGGTTCGGTGGTGTAAGT |
59.891 |
20 |
212 |
335 |
546 |
|
|
